G2193484


Basic Information

Item Value
gene id G2193484
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 4757610 ~ 4758024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2509255
gggTATAGAAATGAGGTAACATACATGCAATATCCCACTGTCACTCAAcaccatgaagaaaacaaaagaaCTGGCAGTTCACAAAGAGACAGATGGTCGTAGACCTTCATAAATCTGGTAATGGCTACAAGAAGATCCACAAACAAATACACCACTGAGCACTGTCAGGGTAATTATTAGAAAATTCAAAAGATATGGAACAGTTGAAAACCTCATGGGTAGAGGACGCAAATGCATTTTGCCCcccaggatagggaggaggatggtgagagaagcaacaaaatCCCCAAGAACCACTGTGAAAAAATTGCAGGCCTTGGTGGCGTCTTGGGGTCACCAGGTCTCAAAAAGCACCGTCACCTCCACATCCGCAGGCTCTTTAGAAGGTttgccagaagaaagccctttctgaccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2509255 True 415 lncRNA 0.45 1 4757610 4758024

Neighbor

gene id symbol gene type direction distance location
LOC118945760 NA coding upstream 48221 4704102 ~ 4713241 (+)
LOC118945757 LOC106584793 coding upstream 59162 4566366 ~ 4698448 (+)
LOC118945759 NA coding upstream 186647 4570173 ~ 4570963 (+)
LOC118945758 LOC103466506 coding upstream 224983 4378293 ~ 4532627 (+)
LOC110521166 LOC106584798 coding upstream 452376 4303164 ~ 4305234 (+)
LOC110522695 LOC106590753 coding downstream 90132 4848156 ~ 4869652 (+)
LOC110521175 NA coding downstream 128594 4886618 ~ 4950815 (+)
LOC110521176 LOC106584785 coding downstream 212637 4970661 ~ 4994824 (+)
rab3il1 LOC106584776 coding downstream 247606 5005630 ~ 5033497 (+)
LOC110522698 LOC106593352 coding downstream 454342 5212366 ~ 5246288 (+)
G2193480 NA non-coding upstream 6366 4751007 ~ 4751244 (+)
G2193479 NA non-coding upstream 7198 4749930 ~ 4750412 (+)
G2193477 NA non-coding upstream 10809 4746302 ~ 4746801 (+)
G2193475 NA non-coding upstream 14627 4742678 ~ 4742983 (+)
G2193472 NA non-coding upstream 23154 4732983 ~ 4734456 (+)
G2193490 NA non-coding downstream 6332 4764356 ~ 4764677 (+)
G2193491 NA non-coding downstream 7491 4765515 ~ 4765876 (+)
G2193498 NA non-coding downstream 21572 4779596 ~ 4779880 (+)
G2193499 NA non-coding downstream 28039 4786063 ~ 4786312 (+)
G2193501 NA non-coding downstream 29379 4787403 ~ 4787704 (+)
LOC110521161 LOC106584807 other upstream 820511 3931206 ~ 3937155 (+)
G2192425 LOC106584810 other upstream 847244 3910104 ~ 3910366 (+)
LOC110521165 fintrim other upstream 971902 3784498 ~ 3796399 (+)
iqch LOC106584827 other upstream 1705158 2941093 ~ 3052608 (+)
G2193497 NA other downstream 19676 4777700 ~ 4779264 (+)
G2193611 LOC106584794 other downstream 348034 5106058 ~ 5108156 (+)
G2193620 NA other downstream 365489 5123513 ~ 5124709 (+)
G2193655 NA other downstream 440502 5198526 ~ 5200369 (+)

Expression


Co-expression Network