G2193498


Basic Information

Item Value
gene id G2193498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 4779596 ~ 4779880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2509274
AtcgggaataaggtgccatttgagggAGACACCAGAGTTGAATGTTAACAGCTAATGCATGCTAACCTGATCTGCTTGTCAGCCATTTGATTTCTCTGTGTTGACGTGTTCCACAATACAACTGCCCGTCTGTCTGAAGGTTTGAGCCAATCAGGACATCTGTTGTGCGTTTCTTTCTCTAGTCTATTAATGGAGACACGTGGCTTGTCAGCTCTTTGTTCGTttttcaaactgtatttgtatcAGTTTGCTGGCTGAAGCGCTGGCCGGTAGAGGTTGAGGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2509274 True 285 lncRNA 0.46 1 4779596 4779880

Neighbor

gene id symbol gene type direction distance location
LOC118945760 NA coding upstream 70207 4704102 ~ 4713241 (+)
LOC118945757 LOC106584793 coding upstream 81148 4566366 ~ 4698448 (+)
LOC118945759 NA coding upstream 208633 4570173 ~ 4570963 (+)
LOC118945758 LOC103466506 coding upstream 246969 4378293 ~ 4532627 (+)
LOC110521166 LOC106584798 coding upstream 474362 4303164 ~ 4305234 (+)
LOC110522695 LOC106590753 coding downstream 68276 4848156 ~ 4869652 (+)
LOC110521175 NA coding downstream 106738 4886618 ~ 4950815 (+)
LOC110521176 LOC106584785 coding downstream 190781 4970661 ~ 4994824 (+)
rab3il1 LOC106584776 coding downstream 225750 5005630 ~ 5033497 (+)
LOC110522698 LOC106593352 coding downstream 432486 5212366 ~ 5246288 (+)
G2193491 NA non-coding upstream 13720 4765515 ~ 4765876 (+)
G2193490 NA non-coding upstream 14919 4764356 ~ 4764677 (+)
G2193484 NA non-coding upstream 21572 4757610 ~ 4758024 (+)
G2193480 NA non-coding upstream 28352 4751007 ~ 4751244 (+)
G2193479 NA non-coding upstream 29184 4749930 ~ 4750412 (+)
G2193499 NA non-coding downstream 6183 4786063 ~ 4786312 (+)
G2193501 NA non-coding downstream 7523 4787403 ~ 4787704 (+)
G2193502 NA non-coding downstream 9115 4788995 ~ 4789252 (+)
G2193503 NA non-coding downstream 10215 4790095 ~ 4790392 (+)
G2193508 NA non-coding downstream 16184 4796064 ~ 4796539 (+)
G2193497 NA other upstream 332 4777700 ~ 4779264 (+)
LOC110521161 LOC106584807 other upstream 842497 3931206 ~ 3937155 (+)
G2192425 LOC106584810 other upstream 869230 3910104 ~ 3910366 (+)
LOC110521165 fintrim other upstream 993888 3784498 ~ 3796399 (+)
G2193611 LOC106584794 other downstream 326178 5106058 ~ 5108156 (+)
G2193620 NA other downstream 343633 5123513 ~ 5124709 (+)
G2193655 NA other downstream 418646 5198526 ~ 5200369 (+)
tph1a LOC106584760 other downstream 523589 5298056 ~ 5308255 (+)

Expression


Co-expression Network