G2193850


Basic Information

Item Value
gene id G2193850
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 4793377 ~ 4795447 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2509761
gctatatacagggggtactggtacagagtcaatgtggaggctatatacaggaggtaccggtacagagtcaatgtggaggctatatacaggaggtaccggtacagagtcaatgtggaggctatatacagggtattacggtactgagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccaatacagagtcaatgtggaggctatatacagggggtaccggtactgagtcaatgtggaggctatatacagggggtaccggtactgagtcaatgtggaggctatatacagggggtaccggtactgagtcaatgtggaggctatatacagggggtaccggtactgagtcaatgtggaggctatatacagggggtaccggtactgag
>TU2509762
gagtcaatgtggaggctatatacagggtattacggtactgagtcaatgtggaggctatatacagggtattacggtactgagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggagactatatacagggtattacggtactgagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggtattacggtactgagtcaatgt
>TU2509760
gagtcaatgtggaggctatatacagggtattacggtactgagtcaatgtggaggctatatacagggtattacggtactgagtcaatgtggaggctatatacagggtattacggtacagagtcaatgtggagactatatacagggtattacggtactgagtcaatgtggaggctatatacagggtattacggtactgagtcaatgtggaggctatatacagggggtaccagtacagagtcaatgtggaggctatatacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2509761 False 457 TUCP 0.50 2 4793377 4794223
TU2509762 False 244 lncRNA 0.44 2 4793877 4795447
TU2509760 True 260 lncRNA 0.44 2 4794017 4795447

Neighbor

gene id symbol gene type direction distance location
LOC110521172 LOC106584780 coding downstream 3628 4735169 ~ 4790249 (-)
LOC118945761 NA coding downstream 75223 4717985 ~ 4718654 (-)
fads2 d6fad_b coding downstream 530595 4238239 ~ 4263282 (-)
LOC110522693 d6fadc coding downstream 594580 4175699 ~ 4199297 (-)
LOC110515904 myrf coding downstream 734137 3949459 ~ 4059740 (-)
pidd1 pidd1 coding upstream 5763 4801210 ~ 4845322 (-)
epx LOC106584777 coding upstream 243770 5039217 ~ 5067190 (-)
hps5 hps5 coding upstream 276501 5071948 ~ 5122084 (-)
gtf2h1 LOC106584761 coding upstream 328054 5123501 ~ 5144889 (-)
muc2.1 LOC106593352 coding upstream 355173 5150620 ~ 5187550 (-)
G2193841 NA non-coding downstream 26999 4766479 ~ 4766878 (-)
G2193826 NA non-coding downstream 35258 4758195 ~ 4758619 (-)
G2193823 NA non-coding downstream 39017 4753300 ~ 4754860 (-)
G2193819 NA non-coding downstream 46559 4747112 ~ 4747318 (-)
G2193817 NA non-coding downstream 48613 4743066 ~ 4745264 (-)
G2193814 NA non-coding upstream 2285 4797732 ~ 4800659 (-)
G2193854 NA non-coding upstream 11595 4807042 ~ 4807445 (-)
G2193865 NA non-coding upstream 59168 4854615 ~ 4854947 (-)
G2193868 NA non-coding upstream 61396 4856843 ~ 4857087 (-)
G2193889 NA non-coding upstream 123167 4918614 ~ 4918913 (-)
G2193810 NA other downstream 61016 4731727 ~ 4732861 (-)
G2193451 NA other downstream 108911 4681737 ~ 4684966 (-)
G2193421 NA other downstream 182410 4610762 ~ 4611467 (-)
G2193227 fd6d other downstream 530678 4190064 ~ 4263199 (-)
LOC118945787 NA other downstream 845894 3941705 ~ 3948302 (-)
LOC110521194 svip other upstream 1035854 5825537 ~ 5836399 (-)
LOC110522707 myo5c other upstream 1413415 6206342 ~ 6221642 (-)
G2194918 NA other upstream 1430899 6226346 ~ 6294511 (-)
G2195405 NA other upstream 1839883 6635330 ~ 6635951 (-)
G2195750 NA other upstream 2451287 7225447 ~ 7270413 (-)

Expression


Co-expression Network