G2193508


Basic Information

Item Value
gene id G2193508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 4796064 ~ 4796539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2509286
attgactcagtaccgtaataccctgtatatagcctccacattgactcagtaccgtaataccctgtatatagcctccacattgactctgcaccgtaataccctgtatatagcctccacattgactctgcaccgtaataccctgtatatagcctccacattgactcagtaccgtaataccctgtatatagcctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactcagtaccgtaataccctgtatatagcctccacattgactcagtaccgtaataccctgtatatagcctccacattgactctgtaccgtaacaccctgtatatagcctccacattgactcagtaccgtaataccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2509286 True 476 lncRNA 0.44 1 4796064 4796539

Neighbor

gene id symbol gene type direction distance location
LOC118945760 NA coding upstream 86675 4704102 ~ 4713241 (+)
LOC118945757 LOC106584793 coding upstream 97616 4566366 ~ 4698448 (+)
LOC118945759 NA coding upstream 225101 4570173 ~ 4570963 (+)
LOC118945758 LOC103466506 coding upstream 263437 4378293 ~ 4532627 (+)
LOC110521166 LOC106584798 coding upstream 490830 4303164 ~ 4305234 (+)
LOC110522695 LOC106590753 coding downstream 51617 4848156 ~ 4869652 (+)
LOC110521175 NA coding downstream 90079 4886618 ~ 4950815 (+)
LOC110521176 LOC106584785 coding downstream 174122 4970661 ~ 4994824 (+)
rab3il1 LOC106584776 coding downstream 209091 5005630 ~ 5033497 (+)
LOC110522698 LOC106593352 coding downstream 415827 5212366 ~ 5246288 (+)
G2193503 NA non-coding upstream 5672 4790095 ~ 4790392 (+)
G2193502 NA non-coding upstream 6812 4788995 ~ 4789252 (+)
G2193501 NA non-coding upstream 8360 4787403 ~ 4787704 (+)
G2193499 NA non-coding upstream 9752 4786063 ~ 4786312 (+)
G2193498 NA non-coding upstream 16184 4779596 ~ 4779880 (+)
G2193510 NA non-coding downstream 1816 4798355 ~ 4799054 (+)
G2193509 NA non-coding downstream 3187 4799726 ~ 4800618 (+)
G2193522 NA non-coding downstream 22195 4818734 ~ 4819102 (+)
G2193524 NA non-coding downstream 27360 4823899 ~ 4824670 (+)
G2193525 NA non-coding downstream 28489 4825028 ~ 4825322 (+)
G2193497 NA other upstream 16800 4777700 ~ 4779264 (+)
LOC110521161 LOC106584807 other upstream 858965 3931206 ~ 3937155 (+)
G2192425 LOC106584810 other upstream 885698 3910104 ~ 3910366 (+)
LOC110521165 fintrim other upstream 1010356 3784498 ~ 3796399 (+)
G2193611 LOC106584794 other downstream 309519 5106058 ~ 5108156 (+)
G2193620 NA other downstream 326974 5123513 ~ 5124709 (+)
G2193655 NA other downstream 401987 5198526 ~ 5200369 (+)
tph1a LOC106584760 other downstream 506930 5298056 ~ 5308255 (+)

Expression


Co-expression Network