Gene
RNA
| Item | Value |
|---|---|
| gene id | G2193933 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 4999804 ~ 5000290 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: torsin-1A-interacting protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2509855 | True | 325 | lncRNA | 0.34 | 2 | 4999804 | 5000290 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pidd1 | pidd1 | coding | downstream | 154482 | 4801210 ~ 4845322 (-) |
| LOC110521172 | LOC106584780 | coding | downstream | 209555 | 4735169 ~ 4790249 (-) |
| LOC118945761 | NA | coding | downstream | 281150 | 4717985 ~ 4718654 (-) |
| fads2 | d6fad_b | coding | downstream | 736522 | 4238239 ~ 4263282 (-) |
| LOC110522693 | d6fadc | coding | downstream | 800507 | 4175699 ~ 4199297 (-) |
| epx | LOC106584777 | coding | upstream | 38927 | 5039217 ~ 5067190 (-) |
| hps5 | hps5 | coding | upstream | 71658 | 5071948 ~ 5122084 (-) |
| gtf2h1 | LOC106584761 | coding | upstream | 123211 | 5123501 ~ 5144889 (-) |
| muc2.1 | LOC106593352 | coding | upstream | 150330 | 5150620 ~ 5187550 (-) |
| kcnc1b | LOC106584763 | coding | upstream | 343650 | 5343940 ~ 5415904 (-) |
| G2193910 | NA | non-coding | downstream | 33636 | 4965935 ~ 4966168 (-) |
| G2193907 | NA | non-coding | downstream | 41075 | 4958484 ~ 4958729 (-) |
| G2193904 | NA | non-coding | downstream | 44865 | 4954737 ~ 4954939 (-) |
| G2193901 | NA | non-coding | downstream | 48978 | 4948004 ~ 4950826 (-) |
| G2193889 | NA | non-coding | downstream | 80891 | 4918614 ~ 4918913 (-) |
| G2193953 | NA | non-coding | upstream | 32253 | 5032543 ~ 5033475 (-) |
| G2193969 | NA | non-coding | upstream | 100434 | 5100724 ~ 5102708 (-) |
| G2193970 | NA | non-coding | upstream | 102445 | 5102735 ~ 5103307 (-) |
| G2193978 | NA | non-coding | upstream | 129959 | 5130249 ~ 5130713 (-) |
| G2193850 | NA | other | downstream | 205581 | 4793377 ~ 4795447 (-) |
| G2193810 | NA | other | downstream | 266943 | 4731727 ~ 4732861 (-) |
| G2193451 | NA | other | downstream | 314838 | 4681737 ~ 4684966 (-) |
| G2193421 | NA | other | downstream | 388337 | 4610762 ~ 4611467 (-) |
| G2193227 | fd6d | other | downstream | 736605 | 4190064 ~ 4263199 (-) |
| LOC110521194 | svip | other | upstream | 831011 | 5825537 ~ 5836399 (-) |
| LOC110522707 | myo5c | other | upstream | 1208572 | 6206342 ~ 6221642 (-) |
| G2194918 | NA | other | upstream | 1226056 | 6226346 ~ 6294511 (-) |
| G2195405 | NA | other | upstream | 1635040 | 6635330 ~ 6635951 (-) |
| G2195750 | NA | other | upstream | 2246444 | 7225447 ~ 7270413 (-) |
