G2193611 (LOC106584794)


Basic Information

Item Value
gene id G2193611
gene name LOC106584794
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 5106058 ~ 5108156 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2509413
GGTTGTAATGGGGCTCACTTctgtagCTGATGAGAGGTGCAGGTGGTACGGCCAGCAGCTGTTTAAACTGGTGCGTGCTGAGGACATCTCCACTGAAGCTGGCCTCCCAGACTCTAGACCCAGGCCTGGCACAGTACAGCAGAggaggaggttgttggccaacgATCACGCCGCGGCTCAGAGGGAAGAAACACGCTCCGTATTCTCCGTCCCGCTCCTTGTTACCGACACGCCAGAACTTCTCTCTGTGGATCGCGAGAGGAGGAGCTGGGTGGTACCTTTAACC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2509413 True 286 TUCP 0.58 2 5106058 5108156

Neighbor

gene id symbol gene type direction distance location
rab3il1 LOC106584776 coding upstream 72561 5005630 ~ 5033497 (+)
LOC110521176 LOC106584785 coding upstream 111234 4970661 ~ 4994824 (+)
LOC110521175 NA coding upstream 157933 4886618 ~ 4950815 (+)
LOC110522695 LOC106590753 coding upstream 236406 4848156 ~ 4869652 (+)
LOC118945760 NA coding upstream 396669 4704102 ~ 4713241 (+)
LOC110522698 LOC106593352 coding downstream 104210 5212366 ~ 5246288 (+)
saal1 saal1 coding downstream 143531 5251687 ~ 5266581 (+)
tph1a LOC106584760 coding downstream 189900 5298056 ~ 5308255 (+)
LOC118945903 NA coding downstream 201219 5309375 ~ 5309554 (+)
LOC110521185 LOC106584765 coding downstream 322393 5430549 ~ 5453043 (+)
G2193603 NA non-coding upstream 36744 5067794 ~ 5069314 (+)
G2193586 NA non-coding upstream 62586 5022265 ~ 5043472 (+)
G2193569 NA non-coding upstream 65747 4978787 ~ 5040311 (+)
G2193587 NA non-coding upstream 82667 5022822 ~ 5023391 (+)
G2193584 NA non-coding upstream 86776 5017605 ~ 5019282 (+)
G2193612 NA non-coding downstream 3078 5111234 ~ 5122115 (+)
G2193620 NA non-coding downstream 15357 5123513 ~ 5124709 (+)
G2193626 LOC106584761 non-coding downstream 28662 5136818 ~ 5137368 (+)
G2193643 NA non-coding downstream 74040 5182196 ~ 5183815 (+)
G2193645 NA non-coding downstream 80086 5188242 ~ 5188700 (+)
G2193497 NA other upstream 326794 4777700 ~ 4779264 (+)
LOC118945757 LOC106584793 other upstream 530034 4566366 ~ 4698448 (+)
LOC110521161 LOC106584807 other upstream 1168959 3931206 ~ 3937155 (+)
G2192425 LOC106584810 other upstream 1195692 3910104 ~ 3910366 (+)
G2193655 NA other downstream 90370 5198526 ~ 5200369 (+)
G2193690 NA other downstream 207624 5315780 ~ 5316614 (+)
G2194273 NA other downstream 721831 5829987 ~ 5832151 (+)

Expression


Co-expression Network