G2194285


Basic Information

Item Value
gene id G2194285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 5998063 ~ 5998490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2510363
TATTTCATTAAAAACAACCTCTGTCTAGAGGTGACCTAGCCCTATTCCATTATAAACAACCTCTGTCTAGAGGTGACCTAGCCCTATTTCATTATAAACAACCTCTGTCTAGAGTTGACCTAGCCCTATTTCATTATAAACAACCTCTGTTTAGAGTTGACCTAGCCCTATTTCATTATAAACAAAAGTTGAACTTAGAGAACTTAGAGTCACTGTTACTATTATTGTAAATTATTTAACTTTACATTTTTATTGTAAATTATTAAAATCTTACTTTTATTAATTAAATTGTACTTTATCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2510363 True 302 lncRNA 0.30 3 5998063 5998490

Neighbor

gene id symbol gene type direction distance location
LOC110522704 ano3 coding upstream 4745 5904002 ~ 5993318 (+)
LOC110522702 LOC106561804 coding upstream 185464 5764845 ~ 5812599 (+)
LOC110521189 slc17a6 coding upstream 263685 5709279 ~ 5734378 (+)
LOC110521188 ano5 coding upstream 298279 5621165 ~ 5699784 (+)
LOC118945765 NA coding upstream 393200 5604084 ~ 5604863 (+)
LOC110521197 LOC106584705 coding downstream 24322 6022812 ~ 6032411 (+)
LOC110521199 LOC106584748 coding downstream 38036 6036526 ~ 6052246 (+)
trnaa-ugc-192 NA coding downstream 81617 6080107 ~ 6080184 (+)
LOC110521201 LOC106584746 coding downstream 124598 6123088 ~ 6130144 (+)
LOC110522709 LOC106584736 coding downstream 341502 6339992 ~ 6357546 (+)
G2194332 NA non-coding upstream 39151 5958103 ~ 5958912 (+)
G2194329 NA non-coding upstream 42265 5953060 ~ 5955798 (+)
G2194299 NA non-coding upstream 73514 5868103 ~ 5924549 (+)
G2194280 NA non-coding upstream 158278 5839288 ~ 5839785 (+)
G2194274 NA non-coding upstream 164794 5832522 ~ 5833269 (+)
G2194286 NA non-coding downstream 151 5998641 ~ 6000989 (+)
G2194374 NA non-coding downstream 56563 6055053 ~ 6055252 (+)
G2194381 LOC106584700 non-coding downstream 74586 6073076 ~ 6074081 (+)
G2194382 NA non-coding downstream 75937 6074427 ~ 6075068 (+)
G2194372 NA non-coding downstream 78263 6076753 ~ 6077908 (+)
G2194273 NA other upstream 165912 5829987 ~ 5832151 (+)
G2193690 NA other upstream 681449 5315780 ~ 5316614 (+)
tph1a LOC106584760 other upstream 690052 5298056 ~ 5308255 (+)
G2193655 NA other upstream 797694 5198526 ~ 5200369 (+)
G2193620 NA other upstream 873354 5123513 ~ 5124709 (+)
LOC118945766 NA other downstream 505147 6503537 ~ 6506780 (+)
LOC110521224 LOC106613263 other downstream 900958 6899321 ~ 6916450 (+)
LOC110521231 LOC106584712 other downstream 1037625 7036115 ~ 7102552 (+)
G2195715 NA other downstream 1206890 7205380 ~ 7205867 (+)
LOC110521233 LOC106584708 other downstream 1341572 7312860 ~ 7342522 (+)

Expression


Co-expression Network