G2194918


Basic Information

Item Value
gene id G2194918
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 6226346 ~ 6294511 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2511183
AGGGAGCTATGGGGTAGAGCCAAGGGGAAGGGGTAGGGAGCCAAGGATAGGGGTGTGGCCATTGGTAAGGGTTAGGGAGCCAATTACCTCTACTAGGCCTGTCTTCTGGCCCCTTTCTTTCATTCCTGCACCTTCTACATACAgagcattcaggaagtattcagaccacctcccctttcccacattttgttacgttacagccttattctaaaattgattttaaaaaatcctcatcaatctacacacaataccccattatgacatcacaataccccattatgacatcacaataccccataatgacaaggggAAACGAGTTTATAgaacttttgcaaatgtataaaaaaaaataaccgaagtaccttatttacataagttaagctcaggtgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggagtccatctgttgtaaattcaattgattggacattatatagacaggtgtgtgcctttccaaatcatgtcccacagatctggggaaaggtaccaaacaatttctgcagcattgaagggccccaagaacagagtggcctccatcattcttaaattgaagaagtttggaacccgagtggcgcagcggtctaaggcactgcatctccatgcaagaggcgtcactacagtccctggttcgaatccaggctgaatcacatctggccgtgattgggagtcccatagggcggcgcacaattggcccagcattgtcccggtttggccgtcattgtaaataagtatttgttcttatctgacttgcctagttaaataaaatacctagggccacctggccaaactgagcaatcgggggagaagtactttgatcagggaggtgaccaagaacccgatagtcactctgacagagctccagagttcctcggtggaaatgagagaaccttccaaaaggacaaccatctctgtagcactccatcaatcaggcctctatggtagaggggccagacggaaagccactcttcagtaaaaggcacatgaaagcttgcttggagtttgcctaaagacTGACAGACcatcagaaacaagattctctggtctgatgaaaccaagattgaactctttgggatgaaatgccaagcgtcacgtgtggtgtggggatgtttttcagcggcagggactgggaaactagccagaccgagggaaagatgaacggagcaaagtacagagagatccttgatgaaaacctgctccagagcgaccagtacttcagactggggcgaatgttcatcttccaacaggacaactacactaagcacatagccaagacaacgcaggagtggcttcgggacaagtctctgaatatcccagagcctggacttgaacccaatcaaacatctctggagagacctgaaaatagctgtgtcgtgacactcccaatccaacctgacagagcttgagaggatctgcagagaagcatgggagaaactccccagataCACGTGTGCCACacgtgtagcgtcatacctaagactCAAGTCAGCTGcaaaaggtgctttaacaaagtactgagtaaagggtatgaatacttatatacatttctaaaaaaaaactatttttgctttgtctttattgggtattgtgtatagattgatcaGGGGGGGGgagaaacaatttaatccattttagaataaggctttaacaaaATGCGGAAGAAGGTGAGTGGTCTGAAATACTTTCTGAACTACTTCATAAAATGAAAATCGAGCAGAAAGCTGTTTTAAATGAGaagttgaaatatatatatttttgcaaagTGTACTCCAGAGGGCCTATATATCTACTGTGGTGACTGATTGAAACCGTATATAGCCTATCACCATGTATCTGAGAGGACAAAGTCAATATTTTAGACATGTTTTGCCTTCTATATATTCCATTTGACATTTTCAATTATGAGGTAATAATATAGAACAATCTGATTTTTATCCTTGTAATTACAATTCTAATCCCACCCCTGCCTTCCTAGCCTAGTCACACATCTGTTTACGCTGTCTTGCCAGTGTCAGCTCTTATGGGCCAAGCCAACACAAACGGATCTGGGACCATCAGGCCATGCCCTCTTCCTCTCCAATGTCCGACTCTTTGTTCTGGTACGTTGATTGAAAATAGCCTGTGTCACGCAGTagctgttgttagctagctagtcatgTTCCAATGAATATTTGCAGCATTGGCTCGCCTATAGTCCTTAAAAGGCTGCTGTTGTATATTATGactgtataatgtgtatatatggggctcccgagtgttgtagcggtctaaggcagtgcagacaccctggttcgactccaggctgtatcacaaccggccgtgattgggagtcccatagggcggcgcacaattggcccggcgtcgtccgggttcGATGTTTGGCCagggtcattgtaaataagaatttgttcttagctgacttgcctagttaaataaaataaaaatcaatgcATCTCTTAACAGTTATGAGCCGTAGTTTACTCTTGGCAATATTTGTCCATTCACTCCAGTGAGAGAATCTCGGCTTGTGTCTAAAATGGCTCCCTatatataggccctggtcaaaagtagtgcactacatagggaataagatgCCCTTCTCATACGACCTCTGAACCTAGCCCAGGAATGCCTGCCTGCCACTATCTGATACTCAAGTCATTTAGGTTTAATCGTCAAGCAACTCACTTAAATGAAATGTTGATCTGAAGGGTGTGCATGTGCATTGACTGTCACGTTATGCCATTTTTTTTGTTTCTGTTTTGTAAATAAACTAGTTTTGCAC
>TU2511185
TTAGCCTAACCTCTCCTACTGACACACTGCTTTATAGCACTGTTAGCCTAATCTCTCCTACTGACATGCTGCTTTATAGCACTGTTAGCCTAACCCACGCTGCTTTATAGCACTGTTAGCCTAACCCTCTCCTACTGACACTCTGCTTTATAGCACTGTTAGCCTAACCCTCTCCTACTGACACGCTGCTTTATAGCACTGTTAGCCTAACCTACTGACACTCTGCTTTATAGCACTGTTAGCCTAACCTCTCCTACTGACACGCTGCTTTATAGCACTGTTAGCCTAACCCACGCTGCTTTATAGCACTGTTAGCCTAACCCACGCTGCTTTATAGCACTGTTAGCCTAACCCTCTCCTACTGACACTCTGCTTTATAGCACTGTTAGCCTAACCCTCTCCTACTGACACACTGCTTTATAGCACTGTTAGCCTAACCTCTCCTACTGACACTCTGCTTTATAGCACTGTTAGCCTACCCTCTCCTACTGACACTCTGCTTTATAGCACTGTTTTTTGTTGTTATCGGATTCACAGTACCACTTAATTTCACCTTCCAATGAGATCAAAAATGAGTGCATTTCAAGTATTAGATGGTATTTTAAAGCAATCCCGTGAGACAATGGGCTGCATCTGAAAATGAATGGATGCTTATTGCCTACATAGTACACTGCTTTTGGCCAGGGCCCGCCTTTTGGCCAGGGCCCGCCTTTTGGCCAGGGCCCGCGTAGGGATTTCAGTGGCAGACTTGTTGAAAGGGATAAGATTTCTCAAGGTTTGATGAATACCACAAAGTTAAACCTTATCTTACATTTTAATTGTCTACTCATTCAACAATGCAATATGTTCTGAAATCACCTAATACATCACTTAatacactctgacacacacaatcacacacaatcacacaatcaAAAAATGAACTTCACCAAAAAATGTTTTCTGTGAGATGTTGTATCCTGTTTTAGAAGAGTGTGTTTCAAAAGTGAATCCAAACCGAAAAATACAATATTGGACTTATTAGGCAACCTAATGACATGCGTATTACATTGCCTTGCCATATCCAAACACTCAATGGGTAGCAGCCATCTGGGAGCTACCAGGTGCTGAATTTAAGACATTATCTTTATCATACATTATCATTATACCAAATCAATTGTACTGGTTCATATCTGAACAGCGTCATCCCACAGTGAAATCTTAAATCTCAAAGCCTGTGCTACTTGTACCGTTCAATATGTGGAAATGGGAGGAAGATTAGATGATTTGCTAGTGCTGGTAGTCTATCTGGGGAAGAAACAATGTCACTCCTAGGAAGGGAAGCAACAACAAACTTGACTGCCTTATTTCTTATTGATAAGTCCAAGGCCTTACACCATATTTACAGACAGACTGTATATAATAGTATGGTAGTACATAGAATCTGCACATTCTAGAAGCGATTCTAGAACCACACAGATTCTGGATCTAGAACCAGAGCTTCACTGTTCATATCAAGGCAGCTGTTTAAACTCTGATAATGTTTTCAAAACTATTTCTTATGGTTCCTTTGTTTATTTGCAGGGTCACTTAATGCATCCATACTGTATAAAACAACCCACACTGAGTGTGCCCTTACTTAGTATCAGTTGTAGATGGACAATAATGTCGGAACAGGCAGACACACGTTTTAGTGGCCATGGTGTGTTTCTCACAGGCTTGAAAAAATATTGTCCACGTCCCAAATatcaccttattccctttatagtgcactacttttgatcagggccctggtccaaaagtagtgcactacatagggaatagggtgccatttagctatgggccatggtctaaagtaatgCCCTTCTCATACGACCTCTGAACCTAGCCCAGGAATGCCTGCCTGCCACTATCTGATACTCAAGTCATTTAGGTTTAATCGTCAAGCAACTCACTTAAATGAAATGTTGATCTGAAGGGTGTGCATGTGCATTGACTGTCACGTTATGCCATTTTTTTTGTTTCTGTTTTGTAAATAAACTAGTTTTGCAC
>TU2511182
tccaaaagtagtgcactacatagggaatagggtgccatttagctatgggccatggtctaaagtagtgcactacatagggaatagggtgccatttggctatGGGGtcatggtctaaagtagtgcactacatagggaatagggtgccatttgggacgcatggtTAAATAACTGGTGTGGCTAAATATGTCACTGAAGGCAACAGAGGCTGCGAAGATAGTTGCATAGATTTGGTTTCTGGAGTTTGATGATGTCAACTTAAGATCTAGATACAAAACGAATCGTGATTGTCTTTCCCGGAGATCCAGCCTTATTTCCATACCAAAGAAAAGCAGTTGTTTAAAAATAACCGAATTTTACGTTAGAAGTTGTAATATCGTAGGAGGTTGTTATACATGGGATTTGTAATCATCCATGCGCTCCTAGAGACTTATGTTATCAGTGAAAAGAAACAGATATAACTTGGTGTACGTCCTTAATGgcactctatatagtgcacttgattttgaccaggacacataggaccttggtctaaagtagtgcactatttagagaatagggtgccattttagggttccatttggaacacactgTATAAGTTTTGtttcatttggggggggggggaaagaaaaGAGGAGAAGCTTCGAAAATCCATGTACAGCATGTTGCTAAGGAAACACTGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACACTGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACGCTGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACACTGGGCCAGACAGCATGTAAACGAATATGAAATGGCGGAGGTCCTTGTTGTTGCTTAGGAAACAATGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACACTGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACACTGGGCAAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTTAGGAAACACTGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACACTGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACACTGGGCCAGACAGCATGTAAACGTATATGAAATGGTGGAGGTCCTTGTTGTTGCTTAGGAAACACTGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACACTGGGCCAGACAGCATGTAAACGTATATGAAATGGCGGAGGTCCTTGTTGTTGCTAAGGAAACACTGGGCCAGACAGCATGTTGTTGAAACCATCActgctagccagccagctatgTGATTATAATAGGATGATTTGCTTGAATTTTGGCTATTGTTATTGTGGTAAAAGTCATAGTCAAAATTAAAGCTCCATTAATTTGTAAATAGGGTAGATACATAGAAATGCAATGTATCAAGAAGAGAAAAAAAGACTACTATATTATGGCCATCATTCTAGCTAAGTAAGTCTGTGCCATTTAAAGGAGAATGAAAAAAAGCTAAATGTATATTAGTCAAGATAATAGagactgtgtgttgtgtgttgtattTCCGGCTCCTCGGTGTATTTGTAAAAGTAATGCTGTCTGTTTGGTCTCTGGTTTGCTGATGTGTTTTGACTTTCCTTTCAAAggtaattattataataataatgataataatgggtCTCTGATGTGTGCTCTGAGCGAGAACAATAGCATGGTTTATTgataagaaaagaaaaaaaaatcaagagttatatgatatatatatatatatattagctgGTTGCATACATTTCTGCAACATCATCGATTCTATAGACATTGTGTTCATGTTTTCAACAAACAAACTTTGTAGGTTCACTTTTTATTGCACTAAATTTCTATGATACGAAACATGGCTTTGTCACAAACCTTATAACGGACAAATGTCACGAGGGAATGACGAATGAAGGCcccgcaacaacaacaacaacaaaaaaacacaacaacaaaaaaaaatattttttatgatCTAAGAAAGAATTGTCATGTAGAAAATGACTACTGTAATTGTCatgtagcaacaaaaaaaaaaagtgcattAATAATGATCTCAGTGAGATTTACTCATTCTCATCCACGAGAATATAATCTAAGCGTTAAGGAAAAATTAAATgtttaaaatgatttttttttttttttatgtttgaaaACCTACATGTTTCATTATGTTAAAACATGACTGTAATACGTAGGCGTGCATGTGTTCATGATTTCTATCCTACTACTTGGAATTGTTAGGTgcctccaaaatggcaccctattccctatatagtacactactttttacCTGGTCAGaactgtagtagtgcactatatagggaatagggtgccttttcgAACGCACACTTATTAAGGTAACCACTGTCTGCTGTGGTAAGGGCTGGCTCTGTGTACCTGACTGGTAGTGCTACTGTAATACCTGACTGGTAGTGCTACTGTAGTACCTGACTGGCAGTGTTACTGTGGTACCTGACTGGCAGTGTTACTGTAATACCTGACTGGCAGTGTTACTGTAATACCTGACTGGCAGTGTTACTGTAGTACCTGACTGGCAGTGTTACTGTGGTACCTGACTGGCAGTGTTACTGTAATACCTGACTGGCAGTGTTACTGTAGTACCTGACTGGTAGTGTTACTGTAATACCTGACTGGCAGTGTTACTGTAATACCTGACTGGCAGTGTTACTGTAGtacctgacagacagtgttactgtagttAACTTAATTACAGTAAGTTACATTATTTTACCTTGTGGGCTGTTTACTTAATATAAGTTCatattgttctgtgtgtatggagCTGTTTCGTTAATGAtggatttatgtttttatttttacatacTTTTTTTAATGTAGCATTTGTAAAGAAATacgttgtttaaaaaaaaaatcaagattTTTGGCATTACTACTATAAGGCACTGATATTTGAATTAAATCTTTGAATGAAGGAAAATGCACCTCCATCTTTAGATGTACGAGTTccaactatagaattagaatgagtTCTAATGATTCTATGGTTCCATCAAGCAGTGACTCTACTCTGTACGTTGTGAGTTCTGACTGACCCTGAGCCAGTACCAACTCAGTTTGACTATCCTGTTCATTCCTACCAGTAGAAGAagctccctccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2511183 False 2824 TUCP 0.44 2 6226346 6229214
TU2511185 False 2031 lncRNA 0.41 2 6226346 6294511
TU2511182 True 3363 lncRNA 0.39 2 6289120 6292738

Neighbor

gene id symbol gene type direction distance location
LOC110522707 myo5c coding downstream 4704 6206342 ~ 6221642 (-)
gnb5a LOC106584742 coding downstream 21708 6197425 ~ 6204638 (-)
ap4e1 ap4e1 coding downstream 33685 6170649 ~ 6192661 (-)
LOC118945802 NA coding downstream 62205 6163158 ~ 6164141 (-)
fd6d fd6d coding downstream 79759 6134746 ~ 6146587 (-)
LOC110521207 LOC106584737 coding upstream 2722 6297233 ~ 6323060 (-)
LOC118945837 NA coding upstream 142004 6436515 ~ 6436678 (-)
LOC118945848 NA coding upstream 145163 6439674 ~ 6439837 (-)
LOC118945859 NA coding upstream 151585 6446096 ~ 6446259 (-)
LOC110521213 LOC106584732 coding upstream 159499 6454010 ~ 6489394 (-)
G2194941 NA non-coding downstream 2684 6223419 ~ 6223662 (-)
G2194940 NA non-coding downstream 4154 6221904 ~ 6222192 (-)
G2194930 NA non-coding downstream 30167 6195944 ~ 6196179 (-)
G2194929 NA non-coding downstream 30617 6195251 ~ 6195729 (-)
G2195001 NA non-coding upstream 73170 6367681 ~ 6368194 (-)
G2195007 NA non-coding upstream 79979 6374490 ~ 6505327 (-)
G2195034 NA non-coding upstream 142214 6436725 ~ 6446531 (-)
G2195050 NA non-coding upstream 199655 6494166 ~ 6494673 (-)
G2195056 NA non-coding upstream 211073 6505584 ~ 6506314 (-)
LOC110521194 svip other downstream 390084 5825537 ~ 5836399 (-)
G2193850 NA other downstream 1432123 4793377 ~ 4795447 (-)
G2193810 NA other downstream 1493485 4731727 ~ 4732861 (-)
G2193451 NA other downstream 1541380 4681737 ~ 4684966 (-)
G2195405 NA other upstream 340819 6635330 ~ 6635951 (-)
G2195750 NA other upstream 952223 7225447 ~ 7270413 (-)
G2195796 NA other upstream 990682 7285193 ~ 7285671 (-)
G2196731 LOC106584678 other upstream 1798190 8092701 ~ 8093996 (-)
G2196733 LOC106596922 other upstream 1805160 8099671 ~ 8107053 (-)
LOC110522708 LOC106584740 coding upstream 209 6229423 ~ 6236710 (-)
LOC110521206 LOC106584738 coding upstream 10407 6239621 ~ 6285310 (-)
G2194955 NA non-coding upstream 29987 6259201 ~ 6260775 (-)
G2194956 NA non-coding upstream 38563 6267777 ~ 6268709 (-)

Expression


Co-expression Network