Gene
RNA
| Item | Value |
|---|---|
| gene id | G2195608 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 7008465 ~ 7091710 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: nuclear receptor coactivator 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2512075 | False | 5861 | lncRNA | 0.44 | 4 | 7008465 | 7014454 |
| TU2512078 | False | 4515 | lncRNA | 0.44 | 5 | 7008465 | 7014454 |
| TU2512061 | False | 1134 | lncRNA | 0.45 | 2 | 7008653 | 7055044 |
| TU2512054 | False | 5256 | lncRNA | 0.44 | 2 | 7008746 | 7014044 |
| TU2512063 | False | 3692 | lncRNA | 0.44 | 3 | 7008746 | 7091710 |
| TU2512065 | False | 5122 | lncRNA | 0.44 | 4 | 7008746 | 7014044 |
| TU2512067 | False | 5228 | lncRNA | 0.44 | 3 | 7008746 | 7014044 |
| TU2512082 | False | 5623 | lncRNA | 0.44 | 3 | 7008746 | 7014454 |
| TU2512083 | False | 3651 | lncRNA | 0.44 | 4 | 7008746 | 7091710 |
| TU2512060 | False | 4117 | lncRNA | 0.44 | 2 | 7009885 | 7014044 |
| TU2512079 | True | 3990 | lncRNA | 0.44 | 3 | 7009885 | 7014044 |
7,000,000
7,010,000
7,020,000
7,030,000
7,040,000
7,050,000
7,060,000
7,070,000
7,080,000
7,090,000
7,100,000
7,110,000
7,120,000
7,130,000
7,140,000
7,150,000
7,160,000
7,170,000
NC_050570.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521226 | parp16 | coding | downstream | 53951 | 6947745 ~ 6954514 (-) |
| LOC110521222 | LOC106584722 | coding | downstream | 137081 | 6862281 ~ 6871384 (-) |
| LOC110521221 | LOC106584724 | coding | downstream | 146415 | 6823752 ~ 6862050 (-) |
| zgc:101540 | slc27a2 | coding | downstream | 188252 | 6799889 ~ 6820213 (-) |
| LOC110521217 | LOC106584699 | coding | downstream | 472845 | 6529260 ~ 6535620 (-) |
| LOC118945775 | LOC106594018 | coding | upstream | 1016822 | 8108532 ~ 8125363 (-) |
| LOC110522722 | LOC106584645 | coding | upstream | 1196096 | 8287806 ~ 8378637 (-) |
| LOC110521246 | LOC106584647 | coding | upstream | 1343487 | 8435197 ~ 8446835 (-) |
| LOC110521247 | LOC106584649 | coding | upstream | 1360608 | 8452318 ~ 8492581 (-) |
| LOC110521248 | LOC106584650 | coding | upstream | 1403125 | 8494835 ~ 8503448 (-) |
| G2195612 | NA | non-coding | downstream | 40 | 7008074 ~ 7008425 (-) |
| G2195611 | NA | non-coding | downstream | 6032 | 7002106 ~ 7002433 (-) |
| G2195610 | NA | non-coding | downstream | 6377 | 7001742 ~ 7002088 (-) |
| G2195607 | NA | non-coding | downstream | 10317 | 6997833 ~ 6998148 (-) |
| G2195605 | NA | non-coding | downstream | 14463 | 6993780 ~ 6994002 (-) |
| G2195614 | LOC106579049 | non-coding | upstream | 2550 | 7094260 ~ 7098002 (-) |
| G2195615 | NA | non-coding | upstream | 6796 | 7098506 ~ 7102542 (-) |
| G2195680 | NA | non-coding | upstream | 20373 | 7112083 ~ 7176265 (-) |
| G2195673 | NA | non-coding | upstream | 20964 | 7112674 ~ 7191194 (-) |
| G2195705 | NA | non-coding | upstream | 100913 | 7192623 ~ 7192827 (-) |
| G2195405 | NA | other | downstream | 372514 | 6635330 ~ 6635951 (-) |
| G2194918 | NA | other | downstream | 779251 | 6226346 ~ 6294511 (-) |
| LOC110522707 | myo5c | other | downstream | 793112 | 6206342 ~ 6221642 (-) |
| LOC110521194 | svip | other | downstream | 1172203 | 5825537 ~ 5836399 (-) |
| G2193850 | NA | other | downstream | 2214242 | 4793377 ~ 4795447 (-) |
| G2195750 | NA | other | upstream | 155024 | 7225447 ~ 7270413 (-) |
| G2195796 | NA | other | upstream | 193483 | 7285193 ~ 7285671 (-) |
| G2196731 | LOC106584678 | other | upstream | 1000991 | 8092701 ~ 8093996 (-) |
| G2196733 | LOC106596922 | other | upstream | 1007961 | 8099671 ~ 8107053 (-) |
| G2196747 | NA | other | upstream | 1034693 | 8126403 ~ 8138110 (-) |
