G2195750



Basic Information


Item Value
gene id G2195750
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 7225447 ~ 7270413 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2512294
cgagcccgttggggagttgcagcgatgagataagattgaaattggggagaaaaaggaggggtaaaataccccaaaataaaaaataaaagacatGCCAGGATGTACTATAAAAGACAAGATAAACAGTCCACTGTCACTGTGGTGCATTTAAGGAATTATAGatttttatacaacgggttaccaaaaTATTCAAATAAGGATGAATTTAACCAATCAGCAtgcaggattagacccacccgttgtataaataACAATAATTCCATTCTTACCTTTTCGAGAACAGGAGAACCCGCAGTGTCCAATGGGTTAATTTATAAAAAGTCGCTGGAACTCCAAtgtaaaaaagaaaataaaaataaaaactgaaataggAAAAAAAGGACAAAAAGAAAAGGCAAAGAAAAGTAATATGAACAGGATCCAATCAAAAGGAGTAACCCTTAACACATTTGTAAAGGCATCTGTTCCATTGTTCATAGGAAGCAGGTTCCAGTCCGTATGGAGCGACTGTCGGCGTGCAGTAATCCAGACCCTCTGTTATGGACCGTTTCCTGACTGCAGGCTATATGCTGTGCACACACTGAATCGTTCCAGAGCAGCCAACAGCTGTCTGAAAAGCCCTTCTCTCTGCACATACCGTATGACCAATCCCAAATCAACCAGTAGCTTCAAAACACCAAggcacttgtgtagatctgagaggattggattgGTGTAATTAATGTGACG
>TU2512293
cgagcccgttggggagttgcagcgatgagataagattgaaattggggagaaaaaggaggggtaaaataccccaaaataaaaaataaaagacatGCCAGGATGTACTATAAAAGACAAGATAAACAGTCCACTGTCACTGTGGTGCATTTAAGGAATTATAGatttttatacaacgggttaccaaaaTATTCAAATAAGGATGAATTTAACCAATCAGCAtgcaggattagacccacccgttgtataaataACAATAATTCCATTCTTACCTTTTCGAGAACAGGAGAACCCGCAGTGTCCAATGGGTTAATTTATAAAAAGTCGCTGGAACTCCAAtgtaaaaaagaaaataaaaataaaaactgaaataggAAAAAAAGGACAAAAAGAAAAGGCAAAGAAAAGTAATATGAACAGGATCCAATCAAAAGGAGTAACCCTTAACACATTTGTAAAGGCATCTGTTCCATTGTTCATAGGAAGCAGGTTCCAGTCCGTATGGAGCGACTGTCGGCGTGCAGTAATCCAGATCCATCCGCTGCATTTGACACCGTggaccatcagatcctcctctccaccctctcagagCTGGACATCTCAAGCGCTGCACACTGACTGCATCCTACCCAGCAGGACACTCTCAGGGCTGGGgttctcaggctctatcagatcctcctctccaccctctcagggctgggtgtctcagactctatcagatcctcctctccaccctctcagggctgggtgtctcagactctatcagatcctcctctcccccctctcagggctgggtgtctcagactctatcagatcctcctctccaccctctcagggctgggtgtctcaggctctatcagatcctctccaccc
>TU2512297
GTAGTCATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTCATACAGGTTAACTGTACTGTAGTCATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTCATACAGGTTAACTGTACTGTAGTTATACAGGTTAACTGTACTGTAGTCATACAGGttaactgtactgtagactacagatggaaagagggaggaggcaTGAGAAAgtaacagacagagggaggaggctgTACATGACATATTTACACAATAGAAACATGGACTCGCCATCTGGTCAGTTCTTGGCTCCTCTTCAACGACAGTCTTCACTCTCCAGTCCAGTAGTGATCGATGATGTAAACCAGCAGGTTGTTGTGGTAGTCAACACATATGATCTTAAACACTTTACCTGTCCCCATGGTGATCGCATCTTTTCGAGAACAGGAGAACCCGCAGTGTCCAATGGGTTAATTTATAAAAAGTCGCTGGAACTCCAAtgtaaaaaagaaaataaaaataaaaactgaaataggAAAAAAAGGACAAAAAGAAAAGGCAAAGAAAAGTAATATGAACAGGATCCAATCAAAAGGAGTAACCCTTAACACATTTGTAAAGGCATCTGTTCCATTGTTCATAGGAAGCAGGTTCCAGTCCGTATGGAGCGACTGTCGGCGTGCAGTAATCCAGGTAATCCACACTAAACTGTATCTGTGACTCCCAATGGTAATACGAAAGGTctgtgggtgtctgtctgtctgcttgcttgcctgccctgccctgcctgcctgtctgctcgtctgtctgtctgcctgcattCCTGCCTGCCCTTTCTTTCTGattgtccttctgtctgtctgccctttctttctgtctgtctgtctgtctgcctgtctgtctgtctgtctgtctgcctgtctgtctgtctgtctgtctgcctgcttgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgctgtaggTCCTGTAGGAGGCTGATCACAAAAAACTGAcccatgaggagaggagag

Function


NR:

description
dynein heavy chain-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2512294 False 729 lncRNA 0.40 2 7225447 7264708
TU2512293 False 870 TUCP 0.45 2 7246734 7264708
TU2512297 True 1215 TUCP 0.43 3 7263802 7270413

Neighbor


gene id symbol gene type direction distance location
LOC118945790 LOC106584702 coding downstream 175465 7039889 ~ 7049982 (-)
LOC110521226 parp16 coding downstream 270933 6947745 ~ 6954514 (-)
LOC110521222 LOC106584722 coding downstream 354063 6862281 ~ 6871384 (-)
LOC110521221 LOC106584724 coding downstream 363397 6823752 ~ 6862050 (-)
zgc:101540 slc27a2 coding downstream 405234 6799889 ~ 6820213 (-)
LOC118945775 LOC106594018 coding upstream 843824 8108532 ~ 8125363 (-)
LOC110522722 LOC106584645 coding upstream 1023098 8287806 ~ 8378637 (-)
LOC110521246 LOC106584647 coding upstream 1170489 8435197 ~ 8446835 (-)
LOC110521247 LOC106584649 coding upstream 1187610 8452318 ~ 8492581 (-)
LOC110521248 LOC106584650 coding upstream 1230127 8494835 ~ 8503448 (-)
G2195763 NA non-coding downstream 151 7225070 ~ 7225296 (-)
G2195762 NA non-coding downstream 444 7224610 ~ 7225003 (-)
G2195758 NA non-coding downstream 7270 7217944 ~ 7218177 (-)
G2195757 NA non-coding downstream 7776 7217433 ~ 7217671 (-)
G2195756 LOC107594389 non-coding downstream 8929 7216297 ~ 7216518 (-)
G2195795 NA non-coding upstream 25073 7289781 ~ 7290681 (-)
G2195798 NA non-coding upstream 26747 7291455 ~ 7291726 (-)
G2195803 NA non-coding upstream 32357 7297065 ~ 7297351 (-)
G2195858 LOC106584709 non-coding upstream 35911 7300619 ~ 7308805 (-)
G2195857 NA non-coding upstream 44317 7309025 ~ 7310119 (-)
G2195405 NA other downstream 589496 6635330 ~ 6635951 (-)
G2194918 NA other downstream 996233 6226346 ~ 6294511 (-)
LOC110522707 myo5c other downstream 1010094 6206342 ~ 6221642 (-)
LOC110521194 svip other downstream 1389185 5825537 ~ 5836399 (-)
G2193850 NA other downstream 2431224 4793377 ~ 4795447 (-)
G2195796 NA other upstream 20485 7285193 ~ 7285671 (-)
G2196731 LOC106584678 other upstream 827993 8092701 ~ 8093996 (-)
G2196733 LOC106596922 other upstream 834963 8099671 ~ 8107053 (-)
G2196747 NA other upstream 861695 8126403 ~ 8138110 (-)
LOC110522723 ticrr other upstream 1301013 8554896 ~ 8573839 (-)
G2195765 NA non-coding downstream 18332 7226300 ~ 7228402 (-)

Expression



Co-expression Network