G2196747


Basic Information

Item Value
gene id G2196747
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 8126403 ~ 8138110 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2513476
ctgaaatgtggcaaaaggttgcaaagttcaagggggccgaatactttcgcaaggcactgtagatggtacATGTATAGATAGGTACGTATGTATGTATAGATGGCACATGTATAGGGATGTACAACAATTAGCCCTGTTCTCCTGCCATGCAGACAGAGCAGTGCCTGACATTACAATATACCGTGAGGTAACATCTTTGCTGTATTTAACAAAAGCAACTAACCAGTCTAACCAgtagtgccacacacacacacacacacagtgtacttACGCATCCACAGATAGTACAACATCTGGCAGACCCTCCGGTGCTCCATGGGAATCTCCACCGAGAAGTCCTGGTAGAAGCAAGGATTTATGGGAAAAGCCTTGGGAAAAGGTGGCCAGTTGTTGTCCTTGCCTGTTGAGGTTCCCCTGTTCTGCAACTCCTTCTCACTGTGCTCCAGGTCTGCAGCCTTCCGCTCCAGCTCCTCCTGCTGCCTCAGCAGGCTAGCCTGGCGTGCAGCCTCCGTCACCTGTGGGCCGGGCTCTGTTGACGGCTGCAGCACGGCAGGCTGGGAAGGGATCCTGGAGGCCGGCATGGTGGGCCCTGATAGGCTAACCGTCTGATGGTCTGGGAAAGGGTTAAATTGATCAATGTGGTCTACGTCAGAGTTGGTCACTTGTGTAACCGAGGGATCCTGAAAAGGGTTGATGTCGTACGATTCTGCAAATGGGTTATCTTCAAATTCCGACATTTTAATAGCGTTTTTATAATATCTTCTCAAAGTAGAAACAATAGAGTCCTCCTATCGCTTGATCAGCTCCTCTTTCTTTCATTGGTTACTTCCTGAAATTGAGTTTAGTGCGCAGAGGTAGGCTACATACGAGAATGACAGTTACGTTTTTTGGATAGTCAAGTACAGTGCGCCATTTGtagataaaaaaacaaacatgtattgaacctt

Function

NR:

description
secretory carrier-associated membrane protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2513476 True 947 TUCP 0.48 5 8126403 8138110
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118945775 LOC106594018 coding downstream 1040 8108532 ~ 8125363 (-)
LOC118945790 LOC106584702 coding downstream 1076421 7039889 ~ 7049982 (-)
LOC110521226 parp16 coding downstream 1171889 6947745 ~ 6954514 (-)
LOC110521222 LOC106584722 coding downstream 1255019 6862281 ~ 6871384 (-)
LOC110521221 LOC106584724 coding downstream 1264353 6823752 ~ 6862050 (-)
LOC110522722 LOC106584645 coding upstream 149696 8287806 ~ 8378637 (-)
LOC110521246 LOC106584647 coding upstream 297087 8435197 ~ 8446835 (-)
LOC110521247 LOC106584649 coding upstream 314208 8452318 ~ 8492581 (-)
LOC110521248 LOC106584650 coding upstream 356725 8494835 ~ 8503448 (-)
isg20 LOC106584653 coding upstream 371438 8509548 ~ 8514228 (-)
G2196732 NA non-coding downstream 27348 8098710 ~ 8099055 (-)
G2196722 NA non-coding downstream 28869 8061050 ~ 8097534 (-)
G2196720 NA non-coding downstream 72451 8053352 ~ 8053952 (-)
G2196700 NA non-coding downstream 100543 8025638 ~ 8025860 (-)
G2196697 NA non-coding downstream 107131 8018033 ~ 8019272 (-)
G2196761 LOC106584637 non-coding upstream 14974 8153084 ~ 8155737 (-)
G2196764 NA non-coding upstream 43876 8181986 ~ 8217326 (-)
G2196797 NA non-coding upstream 80258 8218368 ~ 8218888 (-)
G2196803 NA non-coding upstream 89188 8227298 ~ 8265236 (-)
G2196802 NA non-coding upstream 121311 8259421 ~ 8262487 (-)
G2196733 LOC106596922 other downstream 19350 8099671 ~ 8107053 (-)
G2196731 LOC106584678 other downstream 32407 8092701 ~ 8093996 (-)
G2195796 NA other downstream 840732 7285193 ~ 7285671 (-)
G2195750 NA other downstream 855990 7225447 ~ 7270413 (-)
G2195405 NA other downstream 1490452 6635330 ~ 6635951 (-)
LOC110522723 ticrr other upstream 427611 8554896 ~ 8573839 (-)
G2197247 NA other upstream 560430 8698540 ~ 8744360 (-)
LOC110521266 LOC106584677 other upstream 892867 9030457 ~ 9031665 (-)
LOC110522725 LOC106584670 other upstream 981497 9119598 ~ 9125424 (-)
G2199158 NA other upstream 1858615 9996725 ~ 9997155 (-)

Expression

G2196747 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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G2196747 Expression in each Bioproject

Bar chart with 13 bars.
G2196747 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network