G2197366


Basic Information

Item Value
gene id G2197366
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 8848799 ~ 8849830 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2514279
TGGcaaaatcactttttttttatttaaatccaCATTTGGTCACAAAAATGAAACCAGTCCAGAATAAAaggaaataaacattttaaaaggtGAGGAAATTAAAGGTGAGGTAGCTTGTAGCTGCCACAACAAATTTAAACCCTAATCCATCTCACGGTAGAAACCTTTGTGATGCTGTAGTAGCTTCACACCTACAAACTTCGACTACTGATGTAGAACTGTAATGCTAAAGTATTATTATTTCTGACATACTGGAACAGCTATGCAtttcaaataaaaaaagtaaTATTACCCAGTTATTCTCACAGCGTGCATCCATACATTTACCCAGAGGGATCATGAGCAGTATCTCAGAAGTTAAAACTTGTGCAAAGAGTATTGTAATGTACAATATGAAACAGTTTCAAGAAAGAACAGGGTGGTGTTCTaataggcaccaaacagaagacaATCCGTTTTTTCCTAATAAGAAACCGCCCAAAAAAATGAATCAGttacaaacacatttaaaacGTTTTCCTAACTAAACACGATCAAGGGTTGACTCATTTAGCATGCAGACGGATGAAAAGTTCTTTGACGTGCATGAAGATCATCACTCAAACCGTCAGAACCCGACCAAACCAAGACGACCAAATCTTTTCAGGCTGGAAAGTTAAACAAAATAACTTCAAGTAAAATAGAAAAACTCCACGAGGATCATTTACATCTAAAAAATCCTTCATTTAAAAACAATGTAATCACCTCGCCTCtgttttggttaaaaaaaaaatctgagggaTGGGCATAAAGAAATGAacccactcaaattcatagactgaactatggatgcaaggactgaccatccatgatatcacaaTTATAGTTTGAACCATGTTGagtctatacagtgtttgtttaaaaACAGAGTAAAACAAGCCTATATTTAATATATACACACTTCAAGAATGAATGGAtatagagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaagacgagagaggcctgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2514279 True 1032 lncRNA 0.35 1 8848799 8849830

Neighbor

gene id symbol gene type direction distance location
LOC110521256 LOC106584661 coding downstream 36962 8793937 ~ 8811837 (-)
LOC110521255 api5 coding downstream 56492 8775244 ~ 8792307 (-)
LOC110521254 hsd17b12 coding downstream 150725 8663433 ~ 8698074 (-)
LOC110521253 LOC106584658 coding downstream 253222 8593268 ~ 8595577 (-)
LOC110521252 LOC106584657 coding downstream 261627 8580509 ~ 8587172 (-)
LOC110521260 LOC106561470 coding upstream 91110 8940940 ~ 9006071 (-)
LOC110521264 LOC106584667 coding upstream 102221 8952051 ~ 8956312 (-)
LOC110521271 LOC106593566 coding upstream 162191 9012021 ~ 9021281 (-)
LOC110521266 LOC106584677 coding upstream 180627 9030457 ~ 9031665 (-)
LOC110521265 LOC106584675 coding upstream 189145 9038975 ~ 9042022 (-)
G2197367 NA non-coding downstream 108 8848162 ~ 8848691 (-)
G2197368 NA non-coding downstream 1105 8847444 ~ 8847694 (-)
G2197313 NA non-coding downstream 6334 8750666 ~ 8842465 (-)
G2197371 NA non-coding upstream 3916 8853746 ~ 8854007 (-)
G2197332 LOC106587646 non-coding upstream 12528 8862358 ~ 8966643 (-)
G2197336 NA non-coding upstream 27573 8877403 ~ 8898447 (-)
G2197338 LOC106591196 non-coding upstream 27736 8877566 ~ 8919265 (-)
G2197382 NA non-coding upstream 34461 8884291 ~ 8884565 (-)
G2197247 NA other downstream 105168 8698540 ~ 8744360 (-)
LOC110522723 ticrr other downstream 280565 8554896 ~ 8573839 (-)
G2196747 NA other downstream 710689 8126403 ~ 8138110 (-)
G2196733 LOC106596922 other downstream 741746 8099671 ~ 8107053 (-)
G2196731 LOC106584678 other downstream 754803 8092701 ~ 8093996 (-)
LOC110522725 LOC106584670 other upstream 269777 9119598 ~ 9125424 (-)
G2199158 NA other upstream 1146895 9996725 ~ 9997155 (-)
G2199159 NA other upstream 1147590 9997420 ~ 9998649 (-)
LOC110522734 celsr1 other upstream 2068757 10918587 ~ 11012095 (-)

Expression

G2197366 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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G2197366 Expression in each Bioproject

Bar chart with 17 bars.
G2197366 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network