G2198145


Basic Information

Item Value
gene id G2198145
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 9925798 ~ 9926946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2515181
GTTAGGCCTAGATACTGTACATAGAGTAGTCTAGAAGGTTAGACCTAGATACTGCACATAGAATAGTCTAGAAGGTTAGACCTAGATACTGTACATAGAGTAGTCTAGAAGGTTAGACCTAGATACTGTACATAGAGTAGTCTAGAAGGTTAGACCTAGATACTGTACATAGAGTAGTCTAGAAGGTTAGACCTAGATACTGTACATAGAGTAGTCTAGAAGGTTAGACCTAGATACTGTACATAGAGTAGTCTAGAAGGTTAGACCTAGATACTGTACATAGAGTAGTTTATTAAAAGGTATAGAAGGAACACGGACAAGGCTTCAGAATGCAGCTTTGGTTTTAGAATATTACAATAACACAACATAAATGTCACTCATGACCCCATTCCTGATCTTTTCAGAGAGTAAGTGCATGTATAAATACTCAGGAGGAGGCCTTGTGGAGGTGGAAACATGCTCTTTGCACTCCCACCCCATTCCCCGTCTGTCTGTGGCCCAGGTGCTTAAAATCCATCCTGCCGCTGCAATGGCGATTATCAACAAAGGCATTGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2515181 True 557 lncRNA 0.41 2 9925798 9926946

Neighbor

gene id symbol gene type direction distance location
LOC110521288 LOC106584625 coding upstream 83291 9839621 ~ 9842507 (+)
LOC110521286 LOC106584623 coding upstream 91169 9830522 ~ 9834629 (+)
LOC110522729 eki1 coding upstream 330893 9579503 ~ 9594905 (+)
LOC110521283 LOC106584619 coding upstream 389119 9458616 ~ 9536679 (+)
calcb LOC100135819 coding upstream 475964 9418139 ~ 9449834 (+)
LOC118945823 NA coding downstream 85317 10012263 ~ 10039237 (+)
nucb2b LOC106584632 coding downstream 215885 10142831 ~ 10151795 (+)
LOC110521292 LOC106584633 coding downstream 234013 10160959 ~ 10165266 (+)
LOC118945825 NA coding downstream 257235 10184181 ~ 10184698 (+)
LOC118945768 NA coding downstream 274790 10201736 ~ 10202482 (+)
G2198108 NA non-coding upstream 53481 9870649 ~ 9872317 (+)
G2198097 NA non-coding upstream 68995 9854840 ~ 9856803 (+)
G2198076 NA non-coding upstream 101227 9803878 ~ 9824571 (+)
G2198024 NA non-coding upstream 204230 9719212 ~ 9721568 (+)
G2198018 NA non-coding upstream 214183 9710119 ~ 9711615 (+)
G2198170 NA non-coding downstream 35562 9962508 ~ 9962933 (+)
G2198186 NA non-coding downstream 54429 9981375 ~ 9982401 (+)
G2198212 NA non-coding downstream 87321 10014267 ~ 10020249 (+)
G2198255 NA non-coding downstream 149298 10076244 ~ 10119768 (+)
LOC118945815 NA non-coding downstream 372503 10298713 ~ 10305453 (+)
G2197955 NA other upstream 305511 9619867 ~ 9620287 (+)
G2197055 LOC106584658 other upstream 1330290 8593374 ~ 8595508 (+)
LOC110522717 LOC106584678 other upstream 1832989 7818281 ~ 8094067 (+)
LOC110521236 LOC106584692 other upstream 2209940 7536855 ~ 7718520 (+)
G2198247 NA other downstream 294704 10221650 ~ 10224117 (+)
LOC110521306 LOC106584595 other downstream 941415 10799756 ~ 10920504 (+)
G2198837 NA other downstream 1217267 11144213 ~ 11144672 (+)
LOC110521323 LOC106561036 other downstream 1809528 11683849 ~ 11796935 (+)
G2202196 NA other downstream 3274192 13201138 ~ 13201491 (+)

Expression


Co-expression Network