G2198247



Basic Information


Item Value
gene id G2198247
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 10221650 ~ 10224117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2515291
gGCTTTCAAGTGTAACATCTGTgtccgcagaggtcacactgctggtcAGTGCCGTGTTGGTTCCTCTAGGGTTCGaggcaccattctcacccagagccctctgttacacatgtgtttttgtttgtcacttttcctgagttttccccgcattccaaGCATAAGGCGCTCATCGATTCAGTtgcggctgggaattttattgacagaTCATTTGCCCATAGTCTAGGGATCCCCATCGTTCCCGTGGATGTGCCCTTCCCCgttcacgccttagatagtcgaccattagggtcagggttgattagggaggtcacagttcctttgggcatggtgacgcaggggggtcatACGGAGAGAATTAGCCtcttccttattgactctcctgcatttaccgtggtgctgggcctaccccggttagcttgtcataaccccactgtttcttggccacagagggctctcacggggtggtcgcagGAGTGCTCAGGTAGATGTTTAGGAGTTTCCGTTGGTGttactacggtggagagtccagaacaggtctccaccgtgcgcattccccctgaatatgccgatttggctctcaccTTCTCCAAAAGGAAGGCGAataaattaccacctcatcgacggggcgattgtgcgatagatctcttGGTAGACGCTgtacttcccaggagtcacgtatCCCCCTCACAGGCGGAGACgtaggctatggaaacatatgaatccctgcatcaggggtacattcggttctccacttcacccgcctcctcaagtttattttttgtgaagaacgaGGGAGGTCTGctcccgtgtattgactatcgtgGTCTGAATCAGATCATGGTGAGGTATAGTTACCGGCTACCACTCATAGCCTCAGCGACCACCAAACTACATCTCAGGAGCGCTtataacctggtgcgtatccgggagggagatgagtggaagacggttTTGTCACTGGAATTTCATAGTTACTATTAATTATACATTAAATCACTGTCTATtttataagaatttgtaagattcctatttgcataaaatagacagagaccagtcttgTCAAAATTAGATAGTAGTATTTATTCTCAGAGCGCGCAGCCATGTAACCATGAACAACAGTTgatatacaaaatatgacgtcattggttctagaatgaatctcctcctctcgACCAAGACAAAGCAGGTTTAAAAGTTCTTTCCGACCTACTAGCGCACACACATGACACACAATATAACTGAATTAACTCTTGACCCCTCACCATTATCcatcaccacttagctgacagttccagTTAACGGAAAACCTGGGAAAGCACTAATCTAACCTTATCTAaacatccaaatcaaatcaaatttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttcgacaatgcagtaataaccaatgagtaaactaacctaacaattccaaaactactaccttatacacacaagtgtaaagggataaagaatatgtacataaagatacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaacaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtatatgaatgagtgatggtacagagcggcataggcaagatgcagtagatggtattgagtacagtatatacacatatgagatgagtaatgtagggtatgcaaacaaagtggcatagtttaaagtggctagtgatacatgtattacataaagatgcagtagatgatatagagtacagtatatacatatgagatgagtaatgtagggttgttacggttttcttcgggtgaagtagagtcagaccaaaatgcagcgtggtattcttgaaacatgtttaatgaagacgaaaaaacgaacaatacaaaaacaaacgtaacgtgaaaacctatacagcctatctggtgaaaactaacacagagacaggaacaatcacccacgaaacactcaaagaatatggctgcctaaatatggttcccaatcagagacaacgataaacacctgcctctgattgagaaccactccagacagccatagactttgctagagaaccccactaaaccacaatcccaatacctacgaaaaccccaagacaaaacacaccacataaataaacccatgtcacaccctggcctgaccaaaataataacgaaaacacaaaatattaagaccagggcgtgacaagtgtatgtaaacattaagtggcattgtttaaagtggctagtgatatattttacatcaatttccatcaattcccattattaaagtgtctggagttgagtcagt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2515291 True 2441 TUCP 0.43 2 10221650 10224117

Neighbor


gene id symbol gene type direction distance location
LOC118945824 NA coding upstream 16827 10203094 ~ 10204823 (+)
LOC118945768 NA coding upstream 19168 10201736 ~ 10202482 (+)
LOC118945825 NA coding upstream 36952 10184181 ~ 10184698 (+)
LOC110521292 LOC106584633 coding upstream 56384 10160959 ~ 10165266 (+)
nucb2b LOC106584632 coding upstream 69855 10142831 ~ 10151795 (+)
LOC110521299 LOC106584584 coding downstream 36103 10260220 ~ 10265123 (+)
LOC110521300 LOC106584586 coding downstream 57255 10281372 ~ 10313057 (+)
LOC118945815 NA coding downstream 74596 10298713 ~ 10305453 (+)
LOC110522733 LOC106584588 coding downstream 97992 10322109 ~ 10458656 (+)
LOC110521301 LOC106584589 coding downstream 247735 10471852 ~ 10475563 (+)
G2198255 NA non-coding upstream 101882 10076244 ~ 10119768 (+)
G2198212 NA non-coding upstream 201401 10014267 ~ 10020249 (+)
G2198186 NA non-coding upstream 239249 9981375 ~ 9982401 (+)
G2198139 NA non-coding upstream 253179 9921539 ~ 9968471 (+)
G2198170 NA non-coding upstream 258717 9962508 ~ 9962933 (+)
G2198363 NA non-coding downstream 87144 10311261 ~ 10363358 (+)
G2198422 mob2 non-coding downstream 253238 10477355 ~ 10479163 (+)
G2198458 NA non-coding downstream 290224 10514341 ~ 10515674 (+)
G2198499 NA non-coding downstream 341486 10565603 ~ 10565848 (+)
G2197955 NA other upstream 601363 9619867 ~ 9620287 (+)
calcb LOC100135819 other upstream 771997 9418139 ~ 9449834 (+)
G2197055 LOC106584658 other upstream 1626142 8593374 ~ 8595508 (+)
LOC110522717 LOC106584678 other upstream 2128841 7818281 ~ 8094067 (+)
LOC110521236 LOC106584692 other upstream 2505792 7536855 ~ 7718520 (+)
LOC110521306 LOC106584595 other downstream 644244 10799756 ~ 10920504 (+)
G2198837 NA other downstream 920096 11144213 ~ 11144672 (+)
LOC110521323 LOC106561036 other downstream 1512357 11683849 ~ 11796935 (+)
G2202196 NA other downstream 2977021 13201138 ~ 13201491 (+)
LOC110521355 LOC106584515 other downstream 3068119 13292190 ~ 13301806 (+)

Expression



Co-expression Network