G2198583


Basic Information

Item Value
gene id G2198583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 10711043 ~ 10712247 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2515658
atcagaggcagtagggatgaccagggacatactctgtttagtgagtcctccagatcagaggtagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggtagtagggatgaccagggacatactctgtttagtgagtcctccagatcagaggtagtagggatgaccagggacatactctgtttagtgagtcctccagatcagaggtagtagggatgaccagggacatactctgtttagtgagtcctccagatcagaggtagtagggatgaccagggatgttctctgcttagtgagtcctccagatcagaggtagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggcagtagggatgaccagggacatactctgtttagtgagtcctccagatcagaggcagtagggatgaccagggacatattctgtttagtgagtcctccagatcagaggtagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggtagtagggatgaccagggatgttctctgtttagtgagtcctccagatcagaggtagtagggatgaccagggacatactctgtttagtgagtcctccagatcagaggtagtagggatgaccagggacatactctgtttagtgagtcctccagatcagaggcagtagggatgaccagggatgttctctgctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2515658 True 728 lncRNA 0.50 3 10711043 10712247

Neighbor

gene id symbol gene type direction distance location
LOC110521301 LOC106584589 coding upstream 235480 10471852 ~ 10475563 (+)
LOC110522733 LOC106584588 coding upstream 252387 10322109 ~ 10458656 (+)
LOC110521300 LOC106584586 coding upstream 397986 10281372 ~ 10313057 (+)
LOC118945815 NA coding upstream 405590 10298713 ~ 10305453 (+)
LOC110521299 LOC106584584 coding upstream 445920 10260220 ~ 10265123 (+)
LOC110521306 LOC106584595 coding downstream 87509 10799756 ~ 10920504 (+)
LOC110521307 LOC106584597 coding downstream 209041 10921288 ~ 10922316 (+)
LOC110521310 gramd4 coding downstream 357657 11069904 ~ 11122397 (+)
LOC110521313 cerk coding downstream 489436 11201683 ~ 11226086 (+)
LOC118945803 LOC106584602 coding downstream 536209 11248456 ~ 11253726 (+)
G2198501 LOC106584592 non-coding upstream 84382 10602875 ~ 10626661 (+)
G2198499 NA non-coding upstream 145195 10565603 ~ 10565848 (+)
G2198458 NA non-coding upstream 195369 10514341 ~ 10515674 (+)
G2198422 mob2 non-coding upstream 231880 10477355 ~ 10479163 (+)
G2198363 NA non-coding upstream 347685 10311261 ~ 10363358 (+)
G2198598 LOC106584593 non-coding downstream 23765 10736012 ~ 10737252 (+)
G2198626 NA non-coding downstream 64859 10777106 ~ 10777309 (+)
G2198650 NA non-coding downstream 136300 10848547 ~ 10858751 (+)
G2198687 NA non-coding downstream 220086 10932333 ~ 10932563 (+)
G2198247 NA other upstream 486926 10221650 ~ 10224117 (+)
G2197955 NA other upstream 1090756 9619867 ~ 9620287 (+)
calcb LOC100135819 other upstream 1261390 9418139 ~ 9449834 (+)
G2197055 LOC106584658 other upstream 2115535 8593374 ~ 8595508 (+)
LOC110522717 LOC106584678 other upstream 2618234 7818281 ~ 8094067 (+)
G2198837 NA other downstream 431966 11144213 ~ 11144672 (+)
LOC110521323 LOC106561036 other downstream 1024227 11683849 ~ 11796935 (+)
G2202196 NA other downstream 2488891 13201138 ~ 13201491 (+)
LOC110521355 LOC106584515 other downstream 2579989 13292190 ~ 13301806 (+)

Expression


Co-expression Network