Gene
RNA
| Item | Value |
|---|---|
| gene id | G2199601 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 10953784 ~ 10954044 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2516791 | True | 261 | lncRNA | 0.55 | 1 | 10953784 | 10954044 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521305 | LOC106584593 | coding | downstream | 185147 | 10731413 ~ 10768637 (-) |
| LOC110521303 | LOC106584592 | coding | downstream | 224380 | 10622559 ~ 10729404 (-) |
| LOC110521302 | LOC106584590 | coding | downstream | 358344 | 10477352 ~ 10595440 (-) |
| ccdc77 | ccdc77 | coding | downstream | 672769 | 10271569 ~ 10281015 (-) |
| hdhd5 | LOC100380646 | coding | downstream | 682426 | 10265335 ~ 10271358 (-) |
| gtse1 | gtse1 | coding | upstream | 62026 | 11016070 ~ 11020933 (-) |
| atp2b1b | LOC106584599 | coding | upstream | 67760 | 11021804 ~ 11070857 (-) |
| LOC110522735 | LOC106584602 | coding | upstream | 234582 | 11188626 ~ 11196163 (-) |
| LOC110522736 | LOC106584602 | coding | upstream | 242213 | 11196257 ~ 11198563 (-) |
| LOC110521316 | LOC106597951 | coding | upstream | 375037 | 11329081 ~ 11331702 (-) |
| G2199568 | NA | non-coding | downstream | 44967 | 10907659 ~ 10908817 (-) |
| G2199577 | LOC106584595 | non-coding | downstream | 59007 | 10887022 ~ 10894777 (-) |
| G2199561 | NA | non-coding | downstream | 88423 | 10859362 ~ 10865361 (-) |
| G2199558 | NA | non-coding | downstream | 101695 | 10846153 ~ 10852089 (-) |
| G2199554 | NA | non-coding | downstream | 104981 | 10844047 ~ 10848803 (-) |
| G2199603 | NA | non-coding | upstream | 3225 | 10957269 ~ 10959530 (-) |
| G2199689 | NA | non-coding | upstream | 171558 | 11125602 ~ 11125808 (-) |
| G2199704 | NA | non-coding | upstream | 190321 | 11144365 ~ 11144690 (-) |
| G2199747 | NA | non-coding | upstream | 272435 | 11226479 ~ 11226789 (-) |
| G2199749 | NA | non-coding | upstream | 274179 | 11228223 ~ 11229295 (-) |
| LOC110522734 | celsr1 | other | downstream | 23131 | 10918587 ~ 11012095 (-) |
| G2199159 | NA | other | downstream | 955135 | 9997420 ~ 9998649 (-) |
| G2199158 | NA | other | downstream | 956629 | 9996725 ~ 9997155 (-) |
| LOC110522725 | LOC106584670 | other | downstream | 1828383 | 9119598 ~ 9125424 (-) |
| LOC110521266 | LOC106584677 | other | downstream | 1922119 | 9030457 ~ 9031665 (-) |
| G2199633 | NA | other | upstream | 60483 | 11014527 ~ 11014968 (-) |
| G2201542 | NA | other | upstream | 1294907 | 12248951 ~ 12249982 (-) |
| LOC110521346 | LOC106584547 | other | upstream | 2126552 | 13078925 ~ 13087584 (-) |
| LOC110521347 | LOC106584546 | other | upstream | 2143986 | 13094306 ~ 13103545 (-) |
| urahb | urah | other | upstream | 2713170 | 13666900 ~ 13671199 (-) |
