G2199603


Basic Information

Item Value
gene id G2199603
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 10957269 ~ 10959530 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2516793
TCActactgatagcctgttagagtggtggatataacatctacaacatgtaggctctgttcattactgatagcctgttagagtggtggatataacatctacaacatgtaggttctgttcattgctgatagcctgttagagtggtggatataacatctacaacatgtaggttctgttcattactgatagcctgttagagtggtggatataacatctacaacatgtaggttctgttcattactgatagcctgttagagtggtggatataacatctacaacatgtaggttctgttcattactgatagcctgttagagtggtggatataacatctacatataggctctgttcattactgatagcctgttagagtggtggatataacatctacaacatgtaggttctgttcattactgatagcctgttagagtggtggatataacatatACAACATGTAGgctctgttcattactgatagcctgttagagtggtggatataacatatACAACATGTAGgctctgttcattactgatagcctgttagagtggtggatataacatctacaacgtgtaggctctgttcattgctgatagcctgttagagtggtggatataacatctacaacgtgtaggctctgttcattactgatagcctgttagagtggtggatataacatctacaacatgtaggctctgttcattactgatagcctgttagagtggtggatataacatctacaacatgtaggttctgttcattactgatagcctgttagagtggtggatataacatctacaacgtgtaggctctgttcattactgatagcctgttagagtggtggatataacatctacaacatgtaggctctgttcattactgatagcctgttagagtggtggatataacatctacaacatgtaggctctgttcattactgatagcctgttagagtggtggatgtAACATCTACAAcgtgtaggctctgttcattactgatagcctgttagagaGGTGGATGTAACATCTACAAcgtgtaggctctgttcattgctgatagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2516793 True 1056 lncRNA 0.40 5 10957269 10959530

Neighbor

gene id symbol gene type direction distance location
LOC110521305 LOC106584593 coding downstream 188632 10731413 ~ 10768637 (-)
LOC110521303 LOC106584592 coding downstream 227865 10622559 ~ 10729404 (-)
LOC110521302 LOC106584590 coding downstream 361829 10477352 ~ 10595440 (-)
ccdc77 ccdc77 coding downstream 676254 10271569 ~ 10281015 (-)
hdhd5 LOC100380646 coding downstream 685911 10265335 ~ 10271358 (-)
gtse1 gtse1 coding upstream 56540 11016070 ~ 11020933 (-)
atp2b1b LOC106584599 coding upstream 62274 11021804 ~ 11070857 (-)
LOC110522735 LOC106584602 coding upstream 229096 11188626 ~ 11196163 (-)
LOC110522736 LOC106584602 coding upstream 236727 11196257 ~ 11198563 (-)
LOC110521316 LOC106597951 coding upstream 369551 11329081 ~ 11331702 (-)
G2199601 NA non-coding downstream 3225 10953784 ~ 10954044 (-)
G2199568 NA non-coding downstream 48452 10907659 ~ 10908817 (-)
G2199577 LOC106584595 non-coding downstream 62492 10887022 ~ 10894777 (-)
G2199561 NA non-coding downstream 91908 10859362 ~ 10865361 (-)
G2199558 NA non-coding downstream 105180 10846153 ~ 10852089 (-)
G2199689 NA non-coding upstream 166072 11125602 ~ 11125808 (-)
G2199704 NA non-coding upstream 184835 11144365 ~ 11144690 (-)
G2199747 NA non-coding upstream 266949 11226479 ~ 11226789 (-)
G2199749 NA non-coding upstream 268693 11228223 ~ 11229295 (-)
G2199750 NA non-coding upstream 269848 11229378 ~ 11232079 (-)
LOC110522734 celsr1 other downstream 26616 10918587 ~ 11012095 (-)
G2199159 NA other downstream 958620 9997420 ~ 9998649 (-)
G2199158 NA other downstream 960114 9996725 ~ 9997155 (-)
LOC110522725 LOC106584670 other downstream 1831868 9119598 ~ 9125424 (-)
LOC110521266 LOC106584677 other downstream 1925604 9030457 ~ 9031665 (-)
G2199633 NA other upstream 54997 11014527 ~ 11014968 (-)
G2201542 NA other upstream 1289421 12248951 ~ 12249982 (-)
LOC110521346 LOC106584547 other upstream 2121066 13078925 ~ 13087584 (-)
LOC110521347 LOC106584546 other upstream 2138500 13094306 ~ 13103545 (-)
urahb urah other upstream 2707684 13666900 ~ 13671199 (-)

Expression


Co-expression Network