G2199749


Basic Information

Item Value
gene id G2199749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 11228223 ~ 11229295 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2516947
AACACACTCGGAGTCGCTTACAGTGGGTCTCTTGCTTTGCCTATTCTAACAGTAAATGAAtacctcgatgcctgtctgcctgcattATGTAGCAAGCCATGGCCATGTGACTCACCGcctgtaggagcgaaccattttgGTGAACGAGGGGTGTACCtaaaactggccactgagtgcaTGTACATAccaacctcaattacctcatgcCCTTGCACATCGaatcggtactggtaccctgtgtatatagccaagatatcgttactcattgtgtatttattccttgtgttactatttttcaatttctccccctctctgcattgttgggtcagtaagtaaggatttcactgttagtctacacctgttgtttacaaggCATGTGACATACAAattcaataacatttgatttgagattgTAATTATATCCTTCCAAAATCAAGGCAGACTAGAGCTCTTCATCAGGCGTGTATATTTATTCCTGAAGACACACATCTCAGATCAATATTTTACTTTCAGACACGGGGGATGCTATGTGACCTCCAGTACTAGCTGCAGTGTTAAATCAATGGTATGAGGGAGTATACCAGACGTTTTAGGCAAAATCACTACACAATGACATCTAAACCAGAATGCATCACCACAGCAGCATGACATCTAAACCAGGCTGCATCACCACAGCAGCATGACATCTAAACCAGGCTGCATCACCACATCTAAACCAGGCTGCATCACCACAGCAGCTAAACCAGGCTGCATCACCACAGCATACAGTTGAGACTAGTATTTTGGTCAgatgaaaaaaaaacaaattaagCAGTGAACCACCATGAATTGATACTATTTTCCTTGTCCGCACCAGCAAGGCCAGCTTGACAGTGAGGGGCCGCACCAGCAAGGCCAGCTTGACAGTGAGGGGCCGCACCAGCAAGCACATCTTGACAGTGAGTGGCCGCACCAGCGAGCACATCTTGACAGTGAGGGGTCCACCAGCAAGGCCAGCTTGACAGTGCGGGGTCGCACCAGCAAGGCCAGCTTGACAGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2516947 True 1041 lncRNA 0.46 2 11228223 11229295

Neighbor

gene id symbol gene type direction distance location
LOC110522736 LOC106584602 coding downstream 29660 11196257 ~ 11198563 (-)
LOC110522735 LOC106584602 coding downstream 32060 11188626 ~ 11196163 (-)
atp2b1b LOC106584599 coding downstream 157366 11021804 ~ 11070857 (-)
gtse1 gtse1 coding downstream 207290 11016070 ~ 11020933 (-)
LOC110522734 celsr1 coding downstream 216128 10918587 ~ 11012095 (-)
LOC110521316 LOC106597951 coding upstream 99786 11329081 ~ 11331702 (-)
LOC110521317 LOC106597951 coding upstream 112723 11342018 ~ 11344639 (-)
LOC110521321 LOC106584576 coding upstream 420470 11649765 ~ 11656439 (-)
LOC110521324 brd1 coding upstream 705973 11935268 ~ 11949572 (-)
LOC110521326 LOC106584572 coding upstream 736820 11966115 ~ 11970167 (-)
G2199747 NA non-coding downstream 1434 11226479 ~ 11226789 (-)
G2199704 NA non-coding downstream 83533 11144365 ~ 11144690 (-)
G2199689 NA non-coding downstream 102415 11125602 ~ 11125808 (-)
G2199603 NA non-coding downstream 268693 10957269 ~ 10959530 (-)
G2199601 NA non-coding downstream 274179 10953784 ~ 10954044 (-)
G2199750 NA non-coding upstream 83 11229378 ~ 11232079 (-)
G2199799 NA non-coding upstream 72593 11301888 ~ 11302112 (-)
G2199986 NA non-coding upstream 233839 11463134 ~ 11463662 (-)
G2200009 NA non-coding upstream 242991 11472286 ~ 11475797 (-)
G2200022 NA non-coding upstream 261420 11490715 ~ 11490960 (-)
G2199633 NA other downstream 213255 11014527 ~ 11014968 (-)
G2199159 NA other downstream 1229574 9997420 ~ 9998649 (-)
G2199158 NA other downstream 1231068 9996725 ~ 9997155 (-)
LOC110522725 LOC106584670 other downstream 2102822 9119598 ~ 9125424 (-)
G2201542 NA other upstream 1019656 12248951 ~ 12249982 (-)
LOC110521346 LOC106584547 other upstream 1851301 13078925 ~ 13087584 (-)
LOC110521347 LOC106584546 other upstream 1868735 13094306 ~ 13103545 (-)
urahb urah other upstream 2437919 13666900 ~ 13671199 (-)
si:ch211-106e7.2 LOC106584539 other upstream 2633209 13862396 ~ 13897713 (-)

Expression


Co-expression Network