Gene
RNA
| Item | Value |
|---|---|
| gene id | G2200066 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 11519154 ~ 11519418 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2517290 | True | 265 | lncRNA | 0.44 | 1 | 11519154 | 11519418 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521318 | LOC106597951 | coding | upstream | 97753 | 11418769 ~ 11421401 (+) |
| LOC110521319 | LOC106597951 | coding | upstream | 107734 | 11408759 ~ 11411420 (+) |
| LOC110520942 | NA | coding | upstream | 233852 | 11284984 ~ 11285302 (+) |
| LOC110522737 | NA | coding | upstream | 240207 | 11276180 ~ 11278947 (+) |
| LOC118945769 | NA | coding | upstream | 245360 | 11266353 ~ 11273794 (+) |
| LOC110521320 | LOC106584577 | coding | downstream | 73880 | 11593298 ~ 11594361 (+) |
| LOC110521322 | LOC106584576 | coding | downstream | 154321 | 11673739 ~ 11681317 (+) |
| LOC110521323 | LOC106561036 | coding | downstream | 164431 | 11683849 ~ 11796935 (+) |
| LOC110521327 | LOC106584571 | coding | downstream | 501817 | 12021235 ~ 12023570 (+) |
| LOC110521328 | LOC106584569 | coding | downstream | 560944 | 12080362 ~ 12084936 (+) |
| G2200065 | NA | non-coding | upstream | 21 | 11518926 ~ 11519133 (+) |
| G2200043 | NA | non-coding | upstream | 12753 | 11506162 ~ 11506401 (+) |
| G2199998 | NA | non-coding | upstream | 49440 | 11469263 ~ 11469714 (+) |
| G2199833 | NA | non-coding | upstream | 112461 | 11398282 ~ 11406693 (+) |
| G2198903 | NA | non-coding | upstream | 256055 | 11245412 ~ 11263099 (+) |
| G2200291 | NA | non-coding | downstream | 281860 | 11801278 ~ 11801513 (+) |
| G2200299 | NA | non-coding | downstream | 292241 | 11811659 ~ 11811874 (+) |
| G2200309 | NA | non-coding | downstream | 304471 | 11823889 ~ 11824090 (+) |
| G2200325 | NA | non-coding | downstream | 321249 | 11840667 ~ 11840887 (+) |
| G2200329 | NA | non-coding | downstream | 325541 | 11844959 ~ 11845188 (+) |
| G2198837 | NA | other | upstream | 374482 | 11144213 ~ 11144672 (+) |
| LOC110521306 | LOC106584595 | other | upstream | 641365 | 10799756 ~ 10920504 (+) |
| G2198247 | NA | other | upstream | 1295037 | 10221650 ~ 10224117 (+) |
| G2197955 | NA | other | upstream | 1898867 | 9619867 ~ 9620287 (+) |
| calcb | LOC100135819 | other | upstream | 2069501 | 9418139 ~ 9449834 (+) |
| G2202196 | NA | other | downstream | 1681720 | 13201138 ~ 13201491 (+) |
| LOC110521355 | LOC106584515 | other | downstream | 1772818 | 13292190 ~ 13301806 (+) |
| tnnt3a | LOC100136357 | other | downstream | 1916390 | 13435735 ~ 13462187 (+) |
| G2203653 | NA | other | downstream | 3040029 | 14559447 ~ 14567103 (+) |
