G2200336


Basic Information

Item Value
gene id G2200336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 11854487 ~ 11854830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2517574
gctgagctgtaatcgatgaacaacattctacatagatattcctcttgtccagatgtgttagggcagtgtgcagtgtgatggcgattgcaccgtctgtggacctattggggcggtaagcaaattggagtgggtctagggtgtcaggtagggtggaggtgatatggtccttgacaagtctctcaaagcacttcatgatgacggaagtgagtgctacagggcggtagtcatttagctcagttaccttagctttcttgggaacaggaccaatggtggccctcttgaagcatgtgggaacagcagactgagaTAAGGATAGATTGAATATATCCGTGAACATACAcgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2517574 True 344 lncRNA 0.48 1 11854487 11854830

Neighbor

gene id symbol gene type direction distance location
LOC110521323 LOC106561036 coding upstream 57585 11683849 ~ 11796935 (+)
LOC110521322 LOC106584576 coding upstream 173170 11673739 ~ 11681317 (+)
LOC110521320 LOC106584577 coding upstream 260126 11593298 ~ 11594361 (+)
LOC110521318 LOC106597951 coding upstream 433086 11418769 ~ 11421401 (+)
LOC110521319 LOC106597951 coding upstream 443067 11408759 ~ 11411420 (+)
LOC110521327 LOC106584571 coding downstream 166405 12021235 ~ 12023570 (+)
LOC110521328 LOC106584569 coding downstream 225532 12080362 ~ 12084936 (+)
LOC110522739 LOC106584566 coding downstream 232180 12087010 ~ 12091818 (+)
grm8b grm8 coding downstream 259303 12114133 ~ 12309649 (+)
pot1 pot1 coding downstream 498207 12353037 ~ 12401803 (+)
G2200333 NA non-coding upstream 3442 11850819 ~ 11851045 (+)
G2200332 NA non-coding upstream 3793 11850026 ~ 11850694 (+)
G2200329 NA non-coding upstream 9299 11844959 ~ 11845188 (+)
G2200325 NA non-coding upstream 13600 11840667 ~ 11840887 (+)
G2200309 NA non-coding upstream 30397 11823889 ~ 11824090 (+)
G2200443 NA non-coding downstream 154223 12009053 ~ 12009349 (+)
G2200445 NA non-coding downstream 158984 12013814 ~ 12014740 (+)
G2200450 NA non-coding downstream 170036 12024866 ~ 12025070 (+)
G2200467 NA non-coding downstream 196436 12051266 ~ 12051549 (+)
G2200480 NA non-coding downstream 212349 12067179 ~ 12067463 (+)
G2198837 NA other upstream 709815 11144213 ~ 11144672 (+)
LOC110521306 LOC106584595 other upstream 976698 10799756 ~ 10920504 (+)
G2198247 NA other upstream 1630370 10221650 ~ 10224117 (+)
G2197955 NA other upstream 2234200 9619867 ~ 9620287 (+)
G2202196 NA other downstream 1346308 13201138 ~ 13201491 (+)
LOC110521355 LOC106584515 other downstream 1437406 13292190 ~ 13301806 (+)
tnnt3a LOC100136357 other downstream 1580978 13435735 ~ 13462187 (+)
G2203653 NA other downstream 2704617 14559447 ~ 14567103 (+)
G2203973 NA other downstream 3417215 15272045 ~ 15273733 (+)

Expression


Co-expression Network