Gene
RNA
| Item | Value |
|---|---|
| gene id | G2200445 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 12013814 ~ 12014740 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2517698 | False | 580 | lncRNA | 0.34 | 2 | 12013814 | 12014740 |
| TU2517699 | True | 580 | lncRNA | 0.34 | 2 | 12013814 | 12014740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521323 | LOC106561036 | coding | upstream | 216912 | 11683849 ~ 11796935 (+) |
| LOC110521322 | LOC106584576 | coding | upstream | 332497 | 11673739 ~ 11681317 (+) |
| LOC110521320 | LOC106584577 | coding | upstream | 419453 | 11593298 ~ 11594361 (+) |
| LOC110521318 | LOC106597951 | coding | upstream | 592413 | 11418769 ~ 11421401 (+) |
| LOC110521319 | LOC106597951 | coding | upstream | 602394 | 11408759 ~ 11411420 (+) |
| LOC110521327 | LOC106584571 | coding | downstream | 6495 | 12021235 ~ 12023570 (+) |
| LOC110521328 | LOC106584569 | coding | downstream | 65622 | 12080362 ~ 12084936 (+) |
| LOC110522739 | LOC106584566 | coding | downstream | 72270 | 12087010 ~ 12091818 (+) |
| grm8b | grm8 | coding | downstream | 99393 | 12114133 ~ 12309649 (+) |
| pot1 | pot1 | coding | downstream | 338297 | 12353037 ~ 12401803 (+) |
| G2200443 | NA | non-coding | upstream | 4465 | 12009053 ~ 12009349 (+) |
| G2200336 | NA | non-coding | upstream | 158984 | 11854487 ~ 11854830 (+) |
| G2200333 | NA | non-coding | upstream | 162769 | 11850819 ~ 11851045 (+) |
| G2200332 | NA | non-coding | upstream | 163120 | 11850026 ~ 11850694 (+) |
| G2200329 | NA | non-coding | upstream | 168626 | 11844959 ~ 11845188 (+) |
| G2200450 | NA | non-coding | downstream | 10126 | 12024866 ~ 12025070 (+) |
| G2200467 | NA | non-coding | downstream | 36526 | 12051266 ~ 12051549 (+) |
| G2200480 | NA | non-coding | downstream | 52439 | 12067179 ~ 12067463 (+) |
| G2200483 | NA | non-coding | downstream | 60433 | 12075173 ~ 12106767 (+) |
| G2200592 | NA | non-coding | downstream | 245573 | 12260313 ~ 12260670 (+) |
| G2198837 | NA | other | upstream | 869142 | 11144213 ~ 11144672 (+) |
| LOC110521306 | LOC106584595 | other | upstream | 1136025 | 10799756 ~ 10920504 (+) |
| G2198247 | NA | other | upstream | 1789697 | 10221650 ~ 10224117 (+) |
| G2197955 | NA | other | upstream | 2393527 | 9619867 ~ 9620287 (+) |
| G2202196 | NA | other | downstream | 1186398 | 13201138 ~ 13201491 (+) |
| LOC110521355 | LOC106584515 | other | downstream | 1277496 | 13292190 ~ 13301806 (+) |
| tnnt3a | LOC100136357 | other | downstream | 1421068 | 13435735 ~ 13462187 (+) |
| G2203653 | NA | other | downstream | 2544707 | 14559447 ~ 14567103 (+) |
| G2203973 | NA | other | downstream | 3257305 | 15272045 ~ 15273733 (+) |
