G2200467


Basic Information

Item Value
gene id G2200467
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 12051266 ~ 12051549 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2517725
ttagttgaggtaatttctAAAATCACTATGCACAGATAGTAAACAGaaggtagcagcagtgtaaaaacaaagggggtcaatataaatagtccaggtggccatttgattaattgttcagcagtcttatggattggggatagaagctgttaaggagccttttggacctagacttggctctccggtactgcttgccgtgcggtagcagagagaacagtctatgacttgggtgactggagtctttgacaattttttgggcccacctctgacaccgccaagtatatagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2517725 True 284 lncRNA 0.44 1 12051266 12051549

Neighbor

gene id symbol gene type direction distance location
LOC110521327 LOC106584571 coding upstream 27696 12021235 ~ 12023570 (+)
LOC110521323 LOC106561036 coding upstream 254364 11683849 ~ 11796935 (+)
LOC110521322 LOC106584576 coding upstream 369949 11673739 ~ 11681317 (+)
LOC110521320 LOC106584577 coding upstream 456905 11593298 ~ 11594361 (+)
LOC110521318 LOC106597951 coding upstream 629865 11418769 ~ 11421401 (+)
LOC110521328 LOC106584569 coding downstream 28813 12080362 ~ 12084936 (+)
LOC110522739 LOC106584566 coding downstream 35461 12087010 ~ 12091818 (+)
grm8b grm8 coding downstream 62584 12114133 ~ 12309649 (+)
pot1 pot1 coding downstream 301488 12353037 ~ 12401803 (+)
LOC110521334 LOC106584563 coding downstream 363569 12415118 ~ 12423578 (+)
G2200450 NA non-coding upstream 26196 12024866 ~ 12025070 (+)
G2200445 NA non-coding upstream 36526 12013814 ~ 12014740 (+)
G2200443 NA non-coding upstream 41917 12009053 ~ 12009349 (+)
G2200336 NA non-coding upstream 196436 11854487 ~ 11854830 (+)
G2200333 NA non-coding upstream 200221 11850819 ~ 11851045 (+)
G2200480 NA non-coding downstream 15630 12067179 ~ 12067463 (+)
G2200483 NA non-coding downstream 23624 12075173 ~ 12106767 (+)
G2200592 NA non-coding downstream 208764 12260313 ~ 12260670 (+)
G2200616 NA non-coding downstream 252654 12304203 ~ 12304863 (+)
G2200618 NA non-coding downstream 258145 12309694 ~ 12309936 (+)
G2198837 NA other upstream 906594 11144213 ~ 11144672 (+)
LOC110521306 LOC106584595 other upstream 1173477 10799756 ~ 10920504 (+)
G2198247 NA other upstream 1827149 10221650 ~ 10224117 (+)
G2197955 NA other upstream 2430979 9619867 ~ 9620287 (+)
G2202196 NA other downstream 1149589 13201138 ~ 13201491 (+)
LOC110521355 LOC106584515 other downstream 1240687 13292190 ~ 13301806 (+)
tnnt3a LOC100136357 other downstream 1384259 13435735 ~ 13462187 (+)
G2203653 NA other downstream 2507898 14559447 ~ 14567103 (+)
G2203973 NA other downstream 3220496 15272045 ~ 15273733 (+)

Expression


Co-expression Network