Gene
RNA
| Item | Value |
|---|---|
| gene id | G2200592 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 12260313 ~ 12260670 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2517862 | True | 234 | lncRNA | 0.54 | 2 | 12260313 | 12260670 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522739 | LOC106584566 | coding | upstream | 168495 | 12087010 ~ 12091818 (+) |
| LOC110521328 | LOC106584569 | coding | upstream | 175377 | 12080362 ~ 12084936 (+) |
| LOC110521327 | LOC106584571 | coding | upstream | 236743 | 12021235 ~ 12023570 (+) |
| LOC110521323 | LOC106561036 | coding | upstream | 463411 | 11683849 ~ 11796935 (+) |
| LOC110521322 | LOC106584576 | coding | upstream | 578996 | 11673739 ~ 11681317 (+) |
| pot1 | pot1 | coding | downstream | 92367 | 12353037 ~ 12401803 (+) |
| LOC110521334 | LOC106584563 | coding | downstream | 154448 | 12415118 ~ 12423578 (+) |
| LOC110521338 | LOC105018628 | coding | downstream | 266942 | 12527612 ~ 12545633 (+) |
| slc13a1 | slc13a1 | coding | downstream | 326303 | 12586973 ~ 12609390 (+) |
| cadps2 | cadps2 | coding | downstream | 361664 | 12622334 ~ 12890397 (+) |
| G2200483 | NA | non-coding | upstream | 153546 | 12075173 ~ 12106767 (+) |
| G2200480 | NA | non-coding | upstream | 192850 | 12067179 ~ 12067463 (+) |
| G2200467 | NA | non-coding | upstream | 208764 | 12051266 ~ 12051549 (+) |
| G2200450 | NA | non-coding | upstream | 235243 | 12024866 ~ 12025070 (+) |
| G2200445 | NA | non-coding | upstream | 245573 | 12013814 ~ 12014740 (+) |
| G2200616 | NA | non-coding | downstream | 43533 | 12304203 ~ 12304863 (+) |
| G2200618 | NA | non-coding | downstream | 49024 | 12309694 ~ 12309936 (+) |
| G2200625 | NA | non-coding | downstream | 57962 | 12318632 ~ 12318846 (+) |
| G2200626 | NA | non-coding | downstream | 58181 | 12318851 ~ 12319066 (+) |
| G2200687 | NA | non-coding | downstream | 168217 | 12428887 ~ 12429318 (+) |
| G2198837 | NA | other | upstream | 1115641 | 11144213 ~ 11144672 (+) |
| LOC110521306 | LOC106584595 | other | upstream | 1382524 | 10799756 ~ 10920504 (+) |
| G2198247 | NA | other | upstream | 2036196 | 10221650 ~ 10224117 (+) |
| G2197955 | NA | other | upstream | 2640026 | 9619867 ~ 9620287 (+) |
| G2202196 | NA | other | downstream | 940468 | 13201138 ~ 13201491 (+) |
| LOC110521355 | LOC106584515 | other | downstream | 1031566 | 13292190 ~ 13301806 (+) |
| tnnt3a | LOC100136357 | other | downstream | 1175138 | 13435735 ~ 13462187 (+) |
| G2203653 | NA | other | downstream | 2298777 | 14559447 ~ 14567103 (+) |
| G2203973 | NA | other | downstream | 3011375 | 15272045 ~ 15273733 (+) |
