G2200625


Basic Information

Item Value
gene id G2200625
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 12318632 ~ 12318846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2517897
GGTGTCAATATCACACCTCTTAAACTGGCTCAACACAATGTTGACATGTGGCATTAAGgagtgaaataaatcaaataaatgtagCCTTCCATCGTCCAACAGTGAGAAATCCCTTCGTTTGACTGACCAGAAGGATAAATGAGAATGTGCACTCTAACGTGCATTCTAATGCCTACTGTTTCAGGTGGTTTCAGCCAGATACATACTCAAGACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2517897 True 215 lncRNA 0.41 1 12318632 12318846

Neighbor

gene id symbol gene type direction distance location
grm8b grm8 coding upstream 8983 12114133 ~ 12309649 (+)
LOC110522739 LOC106584566 coding upstream 226814 12087010 ~ 12091818 (+)
LOC110521328 LOC106584569 coding upstream 233696 12080362 ~ 12084936 (+)
LOC110521327 LOC106584571 coding upstream 295062 12021235 ~ 12023570 (+)
LOC110521323 LOC106561036 coding upstream 521730 11683849 ~ 11796935 (+)
pot1 pot1 coding downstream 34191 12353037 ~ 12401803 (+)
LOC110521334 LOC106584563 coding downstream 96272 12415118 ~ 12423578 (+)
LOC110521338 LOC105018628 coding downstream 208766 12527612 ~ 12545633 (+)
slc13a1 slc13a1 coding downstream 268127 12586973 ~ 12609390 (+)
cadps2 cadps2 coding downstream 303488 12622334 ~ 12890397 (+)
G2200618 NA non-coding upstream 8696 12309694 ~ 12309936 (+)
G2200616 NA non-coding upstream 13769 12304203 ~ 12304863 (+)
G2200592 NA non-coding upstream 57962 12260313 ~ 12260670 (+)
G2200483 NA non-coding upstream 211865 12075173 ~ 12106767 (+)
G2200480 NA non-coding upstream 251169 12067179 ~ 12067463 (+)
G2200626 NA non-coding downstream 5 12318851 ~ 12319066 (+)
G2200687 NA non-coding downstream 110041 12428887 ~ 12429318 (+)
G2200694 NA non-coding downstream 119473 12438319 ~ 12438552 (+)
G2200696 NA non-coding downstream 121466 12440312 ~ 12440539 (+)
G2200708 NA non-coding downstream 145376 12464222 ~ 12464537 (+)
G2198837 NA other upstream 1173960 11144213 ~ 11144672 (+)
LOC110521306 LOC106584595 other upstream 1440843 10799756 ~ 10920504 (+)
G2198247 NA other upstream 2094515 10221650 ~ 10224117 (+)
G2197955 NA other upstream 2698345 9619867 ~ 9620287 (+)
G2202196 NA other downstream 882292 13201138 ~ 13201491 (+)
LOC110521355 LOC106584515 other downstream 973390 13292190 ~ 13301806 (+)
tnnt3a LOC100136357 other downstream 1116962 13435735 ~ 13462187 (+)
G2203653 NA other downstream 2240601 14559447 ~ 14567103 (+)
G2203973 NA other downstream 2953199 15272045 ~ 15273733 (+)

Expression


Co-expression Network