Gene
RNA
| Item | Value |
|---|---|
| gene id | G2200727 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 12504885 ~ 12505262 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2518011 | True | 378 | lncRNA | 0.46 | 1 | 12504885 | 12505262 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521334 | LOC106584563 | coding | upstream | 81307 | 12415118 ~ 12423578 (+) |
| pot1 | pot1 | coding | upstream | 103082 | 12353037 ~ 12401803 (+) |
| grm8b | grm8 | coding | upstream | 195236 | 12114133 ~ 12309649 (+) |
| LOC110522739 | LOC106584566 | coding | upstream | 413067 | 12087010 ~ 12091818 (+) |
| LOC110521328 | LOC106584569 | coding | upstream | 419949 | 12080362 ~ 12084936 (+) |
| LOC110521338 | LOC105018628 | coding | downstream | 22350 | 12527612 ~ 12545633 (+) |
| slc13a1 | slc13a1 | coding | downstream | 81711 | 12586973 ~ 12609390 (+) |
| cadps2 | cadps2 | coding | downstream | 117072 | 12622334 ~ 12890397 (+) |
| LOC110521342 | LOC106584552 | coding | downstream | 388058 | 12893320 ~ 12896797 (+) |
| aass | LOC100136272 | coding | downstream | 400887 | 12906149 ~ 12921316 (+) |
| G2200718 | NA | non-coding | upstream | 16824 | 12487860 ~ 12488061 (+) |
| G2200675 | LOC106584561 | non-coding | upstream | 35341 | 12468557 ~ 12469544 (+) |
| G2200708 | NA | non-coding | upstream | 40348 | 12464222 ~ 12464537 (+) |
| G2200696 | NA | non-coding | upstream | 64346 | 12440312 ~ 12440539 (+) |
| G2200694 | NA | non-coding | upstream | 66333 | 12438319 ~ 12438552 (+) |
| G2200728 | NA | non-coding | downstream | 1466 | 12506728 ~ 12507019 (+) |
| G2200737 | NA | non-coding | downstream | 14414 | 12519676 ~ 12520269 (+) |
| G2200739 | NA | non-coding | downstream | 16720 | 12521982 ~ 12522317 (+) |
| G2200740 | NA | non-coding | downstream | 17462 | 12522724 ~ 12522940 (+) |
| G2200750 | NA | non-coding | downstream | 55610 | 12560872 ~ 12561073 (+) |
| LOC110521323 | LOC106561036 | other | upstream | 707950 | 11683849 ~ 11796935 (+) |
| G2198837 | NA | other | upstream | 1360213 | 11144213 ~ 11144672 (+) |
| LOC110521306 | LOC106584595 | other | upstream | 1627096 | 10799756 ~ 10920504 (+) |
| G2198247 | NA | other | upstream | 2280768 | 10221650 ~ 10224117 (+) |
| G2197955 | NA | other | upstream | 2884598 | 9619867 ~ 9620287 (+) |
| G2202196 | NA | other | downstream | 695876 | 13201138 ~ 13201491 (+) |
| LOC110521355 | LOC106584515 | other | downstream | 786974 | 13292190 ~ 13301806 (+) |
| tnnt3a | LOC100136357 | other | downstream | 930546 | 13435735 ~ 13462187 (+) |
| G2203653 | NA | other | downstream | 2054185 | 14559447 ~ 14567103 (+) |
| G2203973 | NA | other | downstream | 2766783 | 15272045 ~ 15273733 (+) |
