Gene
RNA
| Item | Value |
|---|---|
| gene id | G2200739 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 12521982 ~ 12522317 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106579630 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2518024 | True | 228 | lncRNA | 0.37 | 2 | 12521982 | 12522317 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521334 | LOC106584563 | coding | upstream | 98404 | 12415118 ~ 12423578 (+) |
| pot1 | pot1 | coding | upstream | 120179 | 12353037 ~ 12401803 (+) |
| grm8b | grm8 | coding | upstream | 212333 | 12114133 ~ 12309649 (+) |
| LOC110522739 | LOC106584566 | coding | upstream | 430164 | 12087010 ~ 12091818 (+) |
| LOC110521328 | LOC106584569 | coding | upstream | 437046 | 12080362 ~ 12084936 (+) |
| LOC110521338 | LOC105018628 | coding | downstream | 5295 | 12527612 ~ 12545633 (+) |
| slc13a1 | slc13a1 | coding | downstream | 64656 | 12586973 ~ 12609390 (+) |
| cadps2 | cadps2 | coding | downstream | 100017 | 12622334 ~ 12890397 (+) |
| LOC110521342 | LOC106584552 | coding | downstream | 371003 | 12893320 ~ 12896797 (+) |
| aass | LOC100136272 | coding | downstream | 383832 | 12906149 ~ 12921316 (+) |
| G2200737 | NA | non-coding | upstream | 1713 | 12519676 ~ 12520269 (+) |
| G2200728 | NA | non-coding | upstream | 14963 | 12506728 ~ 12507019 (+) |
| G2200727 | NA | non-coding | upstream | 16720 | 12504885 ~ 12505262 (+) |
| G2200718 | NA | non-coding | upstream | 33921 | 12487860 ~ 12488061 (+) |
| G2200675 | LOC106584561 | non-coding | upstream | 52438 | 12468557 ~ 12469544 (+) |
| G2200740 | NA | non-coding | downstream | 407 | 12522724 ~ 12522940 (+) |
| G2200750 | NA | non-coding | downstream | 38555 | 12560872 ~ 12561073 (+) |
| G2200760 | NA | non-coding | downstream | 55118 | 12577435 ~ 12577788 (+) |
| G2200873 | NA | non-coding | downstream | 221491 | 12743808 ~ 12745889 (+) |
| G2200875 | NA | non-coding | downstream | 230364 | 12752681 ~ 12753196 (+) |
| LOC110521323 | LOC106561036 | other | upstream | 725047 | 11683849 ~ 11796935 (+) |
| G2198837 | NA | other | upstream | 1377310 | 11144213 ~ 11144672 (+) |
| LOC110521306 | LOC106584595 | other | upstream | 1644193 | 10799756 ~ 10920504 (+) |
| G2198247 | NA | other | upstream | 2297865 | 10221650 ~ 10224117 (+) |
| G2197955 | NA | other | upstream | 2901695 | 9619867 ~ 9620287 (+) |
| G2202196 | NA | other | downstream | 678821 | 13201138 ~ 13201491 (+) |
| LOC110521355 | LOC106584515 | other | downstream | 769919 | 13292190 ~ 13301806 (+) |
| tnnt3a | LOC100136357 | other | downstream | 913491 | 13435735 ~ 13462187 (+) |
| G2203653 | NA | other | downstream | 2037130 | 14559447 ~ 14567103 (+) |
| G2203973 | NA | other | downstream | 2749728 | 15272045 ~ 15273733 (+) |
