Gene
RNA
| Item | Value |
|---|---|
| gene id | G2200875 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 12752681 ~ 12753196 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2518180 | True | 354 | lncRNA | 0.56 | 2 | 12752681 | 12753196 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc13a1 | slc13a1 | coding | upstream | 143291 | 12586973 ~ 12609390 (+) |
| LOC110521338 | LOC105018628 | coding | upstream | 207048 | 12527612 ~ 12545633 (+) |
| LOC110521334 | LOC106584563 | coding | upstream | 329103 | 12415118 ~ 12423578 (+) |
| pot1 | pot1 | coding | upstream | 350878 | 12353037 ~ 12401803 (+) |
| grm8b | grm8 | coding | upstream | 443032 | 12114133 ~ 12309649 (+) |
| LOC110521342 | LOC106584552 | coding | downstream | 140124 | 12893320 ~ 12896797 (+) |
| aass | LOC100136272 | coding | downstream | 152953 | 12906149 ~ 12921316 (+) |
| LOC110521345 | LOC106584548 | coding | downstream | 303834 | 13057030 ~ 13073884 (+) |
| bet1l | bet1l | coding | downstream | 358511 | 13111707 ~ 13114914 (+) |
| deaf1 | LOC106584542 | coding | downstream | 364371 | 13117567 ~ 13148519 (+) |
| G2200873 | NA | non-coding | upstream | 6792 | 12743808 ~ 12745889 (+) |
| G2200760 | NA | non-coding | upstream | 174893 | 12577435 ~ 12577788 (+) |
| G2200750 | NA | non-coding | upstream | 191608 | 12560872 ~ 12561073 (+) |
| G2200740 | NA | non-coding | upstream | 229741 | 12522724 ~ 12522940 (+) |
| G2200739 | NA | non-coding | upstream | 230364 | 12521982 ~ 12522317 (+) |
| G2200879 | NA | non-coding | downstream | 5629 | 12758825 ~ 12759120 (+) |
| G2200961 | NA | non-coding | downstream | 144357 | 12897553 ~ 12897828 (+) |
| G2200965 | NA | non-coding | downstream | 148941 | 12902137 ~ 12902472 (+) |
| G2200967 | NA | non-coding | downstream | 150147 | 12903343 ~ 12903560 (+) |
| G2202043 | NA | non-coding | downstream | 300571 | 13053767 ~ 13053972 (+) |
| LOC110521323 | LOC106561036 | other | upstream | 955746 | 11683849 ~ 11796935 (+) |
| G2198837 | NA | other | upstream | 1608009 | 11144213 ~ 11144672 (+) |
| LOC110521306 | LOC106584595 | other | upstream | 1874892 | 10799756 ~ 10920504 (+) |
| G2198247 | NA | other | upstream | 2528564 | 10221650 ~ 10224117 (+) |
| G2197955 | NA | other | upstream | 3132394 | 9619867 ~ 9620287 (+) |
| G2202196 | NA | other | downstream | 447942 | 13201138 ~ 13201491 (+) |
| LOC110521355 | LOC106584515 | other | downstream | 539040 | 13292190 ~ 13301806 (+) |
| tnnt3a | LOC100136357 | other | downstream | 682612 | 13435735 ~ 13462187 (+) |
| G2203653 | NA | other | downstream | 1806251 | 14559447 ~ 14567103 (+) |
| G2203973 | NA | other | downstream | 2518849 | 15272045 ~ 15273733 (+) |
