G2202240


Basic Information

Item Value
gene id G2202240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 13222185 ~ 13222642 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2519681
cacagggacactcaaagtcaatcttatGTGAGCAGACCAAGTCTTTTTAGGTTGCTCCAAAACAGAAAGGTGGAATAAATGAGTCGAGAGCAGGTTCTTACATTGAACAAAGTTCTCTTTTGAGGTATTTTCTCTAAAAACAAACACTCCCACACAATCAAGGATGATCTCACAAGGATAACACAAATCATTTTCTTTGCAGGAATAAGTAACACAAGGTGAGTAACTTTTAACTATAAACATAAATCACGGGTGTGTCAGCACCTTAACTATCAGTTCGATGAGAGCTCCTTTCAGGTGGTGGTGCGGATCCATGGTTGCCATTCCCAAGAGGTAGtttgtcctcttcctctccaaaTCGTCAGGTAAATCCTCCCCTTTAGAGAATTAATCACTCTTTTTTTCCAGCCTGTCTCCCCCTGccagttccctcctctctcttgtatGGGGAAGAAAAT

Function

NR:

description
LOW QUALITY PROTEIN: metabotropic glutamate receptor 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2519681 True 458 lncRNA 0.42 1 13222185 13222642

Neighbor

gene id symbol gene type direction distance location
drd4a LOC106584511 coding downstream 35480 13159502 ~ 13186705 (-)
ticam1 LOC106584543 coding downstream 103487 13108364 ~ 13118698 (-)
LOC110521347 LOC106584546 coding downstream 118640 13094306 ~ 13103545 (-)
LOC110521346 LOC106584547 coding downstream 134601 13078925 ~ 13087584 (-)
LOC110521343 LOC106584549 coding downstream 199529 12928324 ~ 13022656 (-)
LOC110521353 LOC106584518 coding upstream 45342 13267984 ~ 13270121 (-)
prr33 LOC106584523 coding upstream 204009 13426651 ~ 13435077 (-)
myod2 myod2 coding upstream 236692 13459334 ~ 13461444 (-)
LOC110521367 LOC106584527 coding upstream 239948 13462590 ~ 13474314 (-)
LOC110521369 LOC106584531 coding upstream 392615 13615257 ~ 13634264 (-)
G2202163 NA non-coding downstream 70455 13146278 ~ 13151730 (-)
G2202137 NA non-coding downstream 130456 13091525 ~ 13091729 (-)
G2202125 NA non-coding downstream 147649 13074227 ~ 13074536 (-)
G2202241 NA non-coding upstream 255 13222897 ~ 13223163 (-)
G2202263 NA non-coding upstream 34542 13257184 ~ 13257423 (-)
G2202409 NA non-coding upstream 53506 13276148 ~ 13320121 (-)
G2202420 LOC106584515 non-coding upstream 75239 13297881 ~ 13301748 (-)
G2202407 NA non-coding upstream 114455 13337097 ~ 13341990 (-)
G2201542 NA other downstream 972203 12248951 ~ 12249982 (-)
G2199633 NA other downstream 2207217 11014527 ~ 11014968 (-)
LOC110522734 celsr1 other downstream 2291532 10918587 ~ 11012095 (-)
urahb urah other upstream 444572 13666900 ~ 13671199 (-)
si:ch211-106e7.2 LOC106584539 other upstream 639862 13862396 ~ 13897713 (-)
G2203060 NA other upstream 788511 14011153 ~ 14012512 (-)
G2203363 LOC106613263 other upstream 951799 14174441 ~ 14244462 (-)
G2204129 NA other upstream 1302322 14524964 ~ 14525468 (-)

Expression


Co-expression Network