G2203055


Basic Information

Item Value
gene id G2203055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 14005456 ~ 14008520 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2520581
GGGactaaatcaaactttatttgaagAGCATTTAAAGTTTTATTAAATGTATTCCTATTATTTAACTTGATTATTGTTTGAGACTTTAATCCAACATATTCATTAATAATTTGTAGACAGACTGGAATTAAAGTCAGACCACGTCAGTGACACAAAAGATACATATAGTGGGGGAGTgggagtatttagtcagccaccaattgtgcatgtatggaatgggccaaaaatacttattttccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctggattttcttttctcattttgtcagtcatagttgaagtgaacctatgatgaaaattacaggcctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtaaatctccttcaaatgttgatatttggttgcgttgacaaccaaacacaattcaatatcacttttgcaatacagtaaatagcctattaacttgttGACAAGTTAACAAATTATGTTGGATTTACATctccaactaaaccaaaaataaaatgttaagcATATGATttagccagtggctcagatgaaacTATGCAAGCATTAGAcatcctttaaatgttgatatttggttgcgttgtcaaccaaacacaattcaatattacttttgtaagacagtaaatagcctaaagtttTTGCtaatttacaaactaatgtaattGAATAAATACTATCTTAAAATGACTAACACATCCATGACCACATGTTGAGGTTACGCTAATGTAACTATAAATGTCTTCTTCTGAAATCATAGAAAGCATGCTTGTTCAAGATGCAAAGGTCGCAGGTCTGTGGAGCTCTTCACAAATGCTtaaataatctgtgcagaatctctAACATCATTGATCACTTGCaatatgtacttttaatgtaatctcaactgcaatccaagtcatttggttctgctattagatgaagcacagtgataacacattaagttGTTGTATAAATACAAAAGATCTGACATTGTATTATCATTCTAACTTTGTTGTGCTTTAAAATGGTTTAAAGTGCTGTGATAACACATTTTagatgaaaacaaaacaaaaaaatcagaCATGGTTTTTCTATTGGAATTTTGTTGTGCTTTCAGATGGTTGAAaccatagtgataacacattgggaataCTACAAACTCTGTCTGTCATTTTGAGTGGGTGATTAAAtgttgaaatctcattgatcaacatcGCAACAATATTACCCCAATTtccatgttgaaatgacgtggtgtgcccCGGGGTTCATGTCTCCAGAAATGTTTTGAATTGGAAAATAACCTGTAAAATGAACTGAATACGAGCAAAAGAAAATCCTTCAAGTCTGCAGACAGTGATGTAAAAGTAGAGAACTTCATATCAGATTCCTCCTGGCACTCTTCGTGAGGTCCATGTTTCATCATGATGGAAACCAATCGTAACAGCTTATTATTTGTCATCTGTGTTTAGGTCCATATCATTGGCCTGACcatatttggaacaaaacaccaTCAGGCCTGGCTGCTGGCCGTTCTCCAGTAAGTGGTCGTTCTTCAGTAAGTGCTCCACTTGACTGGCATCCTGTTCCCCAGTTTAGCCACGGTTGAAGGTCAGATGCTTCCACAACCCTTTTCAAGTAGTGAGTCCAGTTGTCCCTCTGGGGCAAGTTCCTTCACCTCAGTCGGAGTCTCACACACTTTCAACCCATCCTCACCATCCTCTTCATCATCCGAGCTGTCTGCCCAGCGTCCAACCCTTCTGACCCCCTCCCCGACCACAGGTGCGTTCACACAGGGGTTGTGGTCGTAGATTACCAGTTTCAACCCCTGCAAGTGGGACAGACCAGGAAAGCGGCGGATTTTGTTGCGGTCCACATCGATCACGGCCAGAAGGTGCATGGCGAGCAACACTGGCGGGAACTCACACAGCTGGTTCCCGGCTAGCCAGATACTCCTCAGCTCCTCTAACCCACCGAGCTCCATGGGCAGTTTGCTTATCTGGTTGTACCCCAGATGGAGCGTCTTGAGGTTGGGGAGGTCGCAGACCACACTGGGGAACTGAGTGAAACAGTTAGTCTCCAACCACAGGGTATTAAGTTCTTTCAGCTCGCCCAGCTCCCGTGGGAGGCACCAGAGCTGGTTGTTGCCCAGATACAGGATGTTAAGCTGAGGTAGTTGACACACAGCCGCAGGCAGCTCCTCGAAACAGTTGAAGTCAAGAGCTAAGAGTTGCAGCTTCCTCAGGCCCTGCAAGTCTGCAGGTAGGGTGCTCAGGTTGTTGCCACTTAGGTAGAGCTTGACCAGCTCATTGAACAGGCAGGCAGCCACAGGAAGACGACGCAGCTGCAGTTTGCTCAGGTCTAGTGTCCGATCGAGAGGCATCTCCTTCAGGTCGCCCACCAGGAAACGCTGGCAGCGCTCGGAGGGGATAAAGGCCACAGCGCCACGTATGACGTTCCCCATCATGAGCAGCCTGAGTCTCCCTGATGCTGCCCTACACCCACTCTTGTTCAGCCGCAGAGCTGAGGGGGGAGTGAGCAGCTCATGGAAGAATGTCCAGGAAAGTCCATTCTCTAACTGTCATGATTAGCAGTAGAAGCTGTCAAGTCTGGTGCCATTTTACAAAAAACAACAAGAATAACACTGGAAATATGACTAGATGACTGAATCCCTTACAACTTGACTGAAACCCAGAAAGGCAATTCCAATGTCAAACTATAAGTCCATGCATGTTGTGACCCCCACAAAGCTGGAGATTATACTTGACGGTCTCTATAAAAACACCTACTTTAGAGAGTCGTGTGGATTGAGGGGATCCTTCTCACAATAAGACTTCCAAATTATGTTTGCCAGCTTTCCCCCAAATAGTGGTATGTCAGTGTTGTATCCCACCTAGTGAAGGTGTTGCCGATATTCCCAGACCCTTGCACAGACCTCTGTtggctcgctctctttctgtctgtggcTCTGAGCTTTGCCTAGGCTCTTAAGCAGTAGCAAATGACGAGCTGCTCACTCC

Function

NR:

description
leucine-rich repeat-containing protein 10-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2520581 True 3065 lncRNA 0.43 1 14005456 14008520

Neighbor

gene id symbol gene type direction distance location
cnot2 NA coding downstream 14086 13982925 ~ 13991370 (-)
slc41a2a slc41a2 coding downstream 52151 13939537 ~ 13953305 (-)
nfybb nfyb coding downstream 66823 13916667 ~ 13938633 (-)
LOC118945929 NA coding downstream 86830 13918514 ~ 13918626 (-)
si:ch211-106e7.2 LOC106584539 coding downstream 107743 13862396 ~ 13897713 (-)
LOC110522742 LOC106584500 coding upstream 232651 14241171 ~ 14299087 (-)
LOC110521389 LOC106584498 coding upstream 293361 14301881 ~ 14359576 (-)
LOC110520943 NA coding upstream 423484 14432004 ~ 14433690 (-)
LOC110517476 LOC106584495 coding upstream 553377 14561897 ~ 14617511 (-)
LOC110521392 NA coding upstream 736281 14740548 ~ 14746591 (-)
G2203024 NA non-coding downstream 89123 13916032 ~ 13916333 (-)
G2203015 NA non-coding downstream 89893 13915279 ~ 13915563 (-)
G2203014 NA non-coding downstream 90649 13914531 ~ 13914807 (-)
G2203019 NA non-coding downstream 97264 13907977 ~ 13908192 (-)
G2203017 NA non-coding downstream 98085 13907109 ~ 13907371 (-)
G2203056 NA non-coding upstream 2175 14010695 ~ 14011006 (-)
G2203058 LOC106584504 non-coding upstream 15831 14024351 ~ 14025597 (-)
G2203069 NA non-coding upstream 32250 14040770 ~ 14041055 (-)
G2203074 NA non-coding upstream 39027 14047547 ~ 14048491 (-)
G2203075 NA non-coding upstream 41091 14049611 ~ 14049837 (-)
urahb urah other downstream 334476 13666900 ~ 13671199 (-)
LOC110521347 LOC106584546 other downstream 907153 13094306 ~ 13103545 (-)
LOC110521346 LOC106584547 other downstream 917933 13078925 ~ 13087584 (-)
G2201542 NA other downstream 1755474 12248951 ~ 12249982 (-)
G2203060 NA other upstream 2633 14011153 ~ 14012512 (-)
G2203363 LOC106613263 other upstream 165921 14174441 ~ 14244462 (-)
G2204129 NA other upstream 516444 14524964 ~ 14525468 (-)
G2204181 NA other upstream 618574 14627094 ~ 14629178 (-)
G2204315 NA other upstream 882415 14890935 ~ 14893501 (-)

Expression

G2203055 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 80.
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G2203055 Expression in each Bioproject

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G2203055 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network