G2203058 (LOC106584504)



Basic Information


Item Value
gene id G2203058
gene name LOC106584504
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 14024351 ~ 14025597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2520584
TGCGAGCCCACCAGTGGGTACGGGCGGGGGTTTGGGGTCCCCATGTATGGATGTCTTGGTATTTTCTACTTCTTCCACGTCTTCCTCTGCTGGGAAGTCCCACTGGGAGGCACTGGTGCGGTCATTGGTATAGAAATACCTCCTCTGCTCTCTGTCCCAGTGGCACGACCAGCCTTTAGGGGCGGCGTTAAGTTCGTAATGTTTTATGTGCTCAGCGGCTTCCTGCAGCCTGCGGCGGAGATAGATCCCGTTCAGAGCCCCCTCCCGCCA

Function


NR:

description
formin-binding protein 4-like isoform X2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2520584 True 270 lncRNA 0.58 2 14024351 14025597
Loading

Neighbor


gene id symbol gene type direction distance location
cnot2 NA coding downstream 32981 13982925 ~ 13991370 (-)
slc41a2a slc41a2 coding downstream 71046 13939537 ~ 13953305 (-)
nfybb nfyb coding downstream 85718 13916667 ~ 13938633 (-)
LOC118945929 NA coding downstream 105725 13918514 ~ 13918626 (-)
si:ch211-106e7.2 LOC106584539 coding downstream 126638 13862396 ~ 13897713 (-)
LOC110522742 LOC106584500 coding upstream 215574 14241171 ~ 14299087 (-)
LOC110521389 LOC106584498 coding upstream 276284 14301881 ~ 14359576 (-)
LOC110520943 NA coding upstream 406407 14432004 ~ 14433690 (-)
LOC110517476 LOC106584495 coding upstream 536300 14561897 ~ 14617511 (-)
LOC110521392 NA coding upstream 719204 14740548 ~ 14746591 (-)
G2203056 NA non-coding downstream 13345 14010695 ~ 14011006 (-)
G2203055 NA non-coding downstream 15831 14005456 ~ 14008520 (-)
G2203024 NA non-coding downstream 108018 13916032 ~ 13916333 (-)
G2203015 NA non-coding downstream 108788 13915279 ~ 13915563 (-)
G2203014 NA non-coding downstream 109544 13914531 ~ 13914807 (-)
G2203069 NA non-coding upstream 15173 14040770 ~ 14041055 (-)
G2203074 NA non-coding upstream 21950 14047547 ~ 14048491 (-)
G2203075 NA non-coding upstream 24014 14049611 ~ 14049837 (-)
G2203076 NA non-coding upstream 24544 14050141 ~ 14050585 (-)
G2203312 NA non-coding upstream 88785 14114382 ~ 14145257 (-)
G2203060 NA other downstream 11839 14011153 ~ 14012512 (-)
urahb urah other downstream 353371 13666900 ~ 13671199 (-)
LOC110521347 LOC106584546 other downstream 926048 13094306 ~ 13103545 (-)
LOC110521346 LOC106584547 other downstream 936828 13078925 ~ 13087584 (-)
G2203363 LOC106613263 other upstream 148844 14174441 ~ 14244462 (-)
G2204129 NA other upstream 499367 14524964 ~ 14525468 (-)
G2204181 NA other upstream 601497 14627094 ~ 14629178 (-)
G2204315 NA other upstream 865338 14890935 ~ 14893501 (-)
LOC110521406 dennd2a other upstream 1319426 15322978 ~ 15376606 (-)

Expression


G2203058(LOC106584504) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G2203058(LOC106584504) Expression in each Bioproject

Bar chart with 9 bars.
G2203058(LOC106584504) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network