G2203695


Basic Information

Item Value
gene id G2203695
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 14848301 ~ 14850812 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2521340
aTTACTCCATAGACTAGGGTTCAGTGGGTATTTTGCTACTATTTACACTGTTTGTTTTATAGATGAAATACTAAAGCTGCCTCATCAAACCAGCCATCAATCCTTCCCAGAACTGTTGAGAATGTTTCAAAGACAGAATGAAATGATCTTTCCTGTGTGCAGGAATGCTTTTCTGATGGAAAGGATATACAGTACGTGTGTGTATTTTCCGTGAGGGAATGTTTTTTGTTCTTTGCTTACCGTAGCAAATTCTCATGAATCCACAaatgaatgtttttttattggtGTAATGGACCtagcttcactctctctctacaccacgtTCTATTAATGCTTTGTACATAGATTCAGTGATTATGTGATTGCTTGCCCCAACTATAACCAGAGGTTTGCAAGATACTAACTATTATTGGGTATGTTTTGTATTCCTTTTTGTCAGGTAAATACATTTCAATGTTTTAAATGGTACAGAAATGTAGGTATGTTTTTGATTAAGCGCTACCTAATTTGACAATGTTATAGTTGAGTTGGATCATATTTTTATATGAGTATATCAGAAATTGTTTCGTTGAATAACTAGGCTGAAAAATGCAATGTAAATAGAATAGCTAAGTATCTGGTGATACAACCATAGATGTGATTCCCACTGGGGACATTCCTTTGGTTAATTcccacactagagagagagagagagagagacagagagagacagagagaaagagggagagttaACATGTTCTCTATGTGCTGTGCTTCGGTGTAGGGATACTAAAAGCACTCATAGCAAATATCAACACTTGAACACAAAACCTTTCATGGGTTATTGACACTATTTTCACTCAACAACATGATCTGGATATATTATTCGTCTTGAACATGCATAAGTAAATCATCAGCGTTAAGACTGGTAATAAGCTATCGTGTCACAGATTCCACATCAATACTGCAGGTTTCCTTCTATGCTATGGTCTCAGGTGGAAGATTAGGTAATAAAGGGGATGATTAGGGCGTAATTTCACTATTCAGAACATAAATGCTCCATAACTGCCTCATTATGTTCTTCAAGCCAaacggtttgttgtttttgtggcCCTACTATATCCCTTCTCTGTTCtgatacatgtacagtatatagaacattacacactCATAACTTGTCCACAATGAACAGTGATTTCATCACAACTAAATGCAGTAAAGATGCAGTATATTGTTTATTAGAAACTGAGtgtttcgagccctgaatgctgattggctgatatttcagaccatataccacgggtatgatgacaaaacatgtatttttactgccctaattacgttggtaaccagtttataatagcaataaggcacttcgggggtttgtggtatatggccaatacaccacagctaagggctgtatccaggcactccgcgttgcgcataagaacatcccttagccgtggtatattggccatataccacaccccctctggccttattgcttaattaacatGCTTCTGCTGTATCAAGCGTTTTACTGGCTGCCCTCCTCACTCGCTGCTGTGTTCTAACTTACTTAATTATAATCATTATAATCATGCCATATGTTAGATGACTGAATTTCAAGCTGCCTGTAATGGCAGTTCTACAATATCTATTGGTCTGGATTGTCAGACCTCTGCGAAATGCAACGCTGCTTTAATCCACTAGATTCTAGAATCGCAAGGTGAACAGAACACATTAGGGATTAAACTCAACCCGTGCCTTAACCTATGACATACAACACTAGACACAATGGAGTAAAGTAAAGCTGCACACAGTTCTGTACAGTTATGTGTTCTCCTGCCAGAAGCTGCTGGTATGGATATGATACTACACAGTACAGAGATACACAAAGAGAGGATATGGCGTCATGACAGAATTACGGAAGGTTTCAAAATTGTGATAGGCAGACAGACCATTGTTGAATCTGTGGTACATAACGACTGTTTGGAAGTACATTCCTCCACATTAGAGAGGTTGCTCTCTTGCAATAGTGTAAATACAAACAAGATTATATAATGGTTCAAACACTAGAGGAAAAACTCAGAGGAGAAGTTATGTGATTGGTAAATTGAAGATGTCTGCTACCCTTAAGGATCTATATTGTTTTGTGTTGAATTGACAAGGGACTATTGACAAGTATCAGGGAAAATATTGTGTCCCTTAGTTTATACTAGCTCAGGACATAGCGAGGTACTGTTCTTCTTTTATTTTTCAAGTGAGTTTATAGTGCCCTGCCATACAGcacacatataataataataataataataaatacaactCTGCAGAGATGATGAGTGCAGAAGATATAGGAAAAGGTTTGTATTTTGTAGTAAAGAGTTGATGCAGTGTTTTTATGGCTAGTGTCATGCAAAGAGACTGGAGACAGTCTTTGGATGCTTTGTTTATGTATACTGTGGCTTGGTAACAATAAAGTACATTTTTGATGAATGTTTATCTAGTAATTTAAACAACAAACAAGTTGACT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2521340 True 2512 lncRNA 0.38 1 14848301 14850812

Neighbor

gene id symbol gene type direction distance location
LOC110521393 LOC106584489 coding upstream 1117 14780910 ~ 14848042 (+)
LOC118945780 NA coding upstream 75580 14761128 ~ 14772721 (+)
LOC110521391 LOC106584496 coding upstream 420782 14383407 ~ 14427519 (+)
LOC110521390 LOC106584497 coding upstream 466867 14370026 ~ 14381434 (+)
LOC110521387 LOC106584502 coding upstream 618198 14191124 ~ 14230103 (+)
LOC110521396 yars2 coding downstream 4537 14855349 ~ 14862158 (+)
cdkn1bb LOC106584490 coding downstream 11351 14862163 ~ 14868180 (+)
LOC110521404 LOC106560988 coding downstream 315465 15166277 ~ 15181233 (+)
LOC118945892 NA coding downstream 334352 15185164 ~ 15185354 (+)
LOC110521401 LOC106584463 coding downstream 354969 15205781 ~ 15215520 (+)
G2203758 NA non-coding upstream 3756 14844337 ~ 14844545 (+)
G2203713 NA non-coding upstream 4018 14843665 ~ 14844283 (+)
G2203716 NA non-coding upstream 57241 14788371 ~ 14791060 (+)
G2203700 NA non-coding upstream 106005 14740466 ~ 14742296 (+)
G2203759 NA non-coding downstream 6323 14857135 ~ 14857340 (+)
G2203762 NA non-coding downstream 19256 14870068 ~ 14870286 (+)
G2203770 NA non-coding downstream 29434 14880246 ~ 14880464 (+)
G2203925 NA non-coding downstream 315841 15166653 ~ 15211610 (+)
LOC110521405 NA non-coding downstream 418176 15268726 ~ 15271364 (+)
G2203653 NA other upstream 281198 14559447 ~ 14567103 (+)
tnnt3a LOC100136357 other upstream 1386114 13435735 ~ 13462187 (+)
LOC110521355 LOC106584515 other upstream 1553141 13292190 ~ 13301806 (+)
G2202196 NA other upstream 1646810 13201138 ~ 13201491 (+)
LOC110521323 LOC106561036 other upstream 3051366 11683849 ~ 11796935 (+)
G2203973 NA other downstream 421233 15272045 ~ 15273733 (+)
G2205546 NA other downstream 1379359 16230171 ~ 16232396 (+)
G2206179 NA other downstream 2312825 17163637 ~ 17164159 (+)
G2206268 LOC106584433 other downstream 2324605 17175417 ~ 17175872 (+)
G2206271 NA other downstream 2328589 17179401 ~ 17179695 (+)

Expression


Co-expression Network