Gene
RNA
| Item | Value |
|---|---|
| gene id | G2210830 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 20643335 ~ 20712660 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2529198 | True | 2440 | lncRNA | 0.41 | 2 | 20643335 | 20712660 |
20,630,000
20,640,000
20,650,000
20,660,000
20,670,000
20,680,000
20,690,000
20,700,000
20,710,000
20,720,000
20,730,000
20,740,000
20,750,000
20,760,000
20,770,000
NC_050570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cts12 | LOC106584253 | coding | downstream | 12566 | 20628580 ~ 20630769 (-) |
| lama3 | LOC106584357 | coding | downstream | 15346 | 20611261 ~ 20627989 (-) |
| LOC110521523 | LOC106584358 | coding | downstream | 32887 | 20596104 ~ 20610448 (-) |
| LOC110521522 | LOC106584254 | coding | downstream | 48457 | 20592266 ~ 20594878 (-) |
| LOC110521521 | LOC106584255 | coding | downstream | 72362 | 20561009 ~ 20570973 (-) |
| LOC110521532 | LOC106584351 | coding | upstream | 4454 | 20717114 ~ 20719732 (-) |
| LOC110521545 | NA | coding | upstream | 640055 | 21352715 ~ 21360879 (-) |
| LOC110521548 | LOC106584340 | coding | upstream | 954539 | 21666793 ~ 21800817 (-) |
| LOC110521551 | LOC106584337 | coding | upstream | 1297683 | 22010343 ~ 22107387 (-) |
| LOC110522763 | LOC100286605 | coding | upstream | 1467437 | 22180097 ~ 22654975 (-) |
| G2210822 | NA | non-coding | downstream | 957 | 20642033 ~ 20642378 (-) |
| LOC110521519 | NA | non-coding | downstream | 103547 | 20533878 ~ 20539788 (-) |
| G2210771 | NA | non-coding | downstream | 118976 | 20523695 ~ 20524359 (-) |
| G2210769 | NA | non-coding | downstream | 120224 | 20518340 ~ 20523111 (-) |
| G2210766 | NA | non-coding | downstream | 130697 | 20512000 ~ 20512638 (-) |
| G2210919 | NA | non-coding | upstream | 95383 | 20808043 ~ 20808280 (-) |
| G2210926 | NA | non-coding | upstream | 105700 | 20818360 ~ 20818560 (-) |
| G2210929 | NA | non-coding | upstream | 106909 | 20819569 ~ 20819843 (-) |
| G2210934 | NA | non-coding | upstream | 114414 | 20827074 ~ 20827313 (-) |
| G2210935 | NA | non-coding | upstream | 115815 | 20828475 ~ 20828828 (-) |
| LOC110521508 | LOC106584371 | other | downstream | 508120 | 20129636 ~ 20197258 (-) |
| LOC110521505 | LOC106584372 | other | downstream | 559751 | 20067742 ~ 20083690 (-) |
| LOC110521464 | LOC106584409 | other | downstream | 2319930 | 18306119 ~ 18392555 (-) |
| G2208093 | NA | other | downstream | 2455810 | 18187125 ~ 18187525 (-) |
| G2211274 | ttc14 | other | upstream | 592181 | 21304841 ~ 21306542 (-) |
| G2212755 | NA | other | upstream | 953304 | 21665964 ~ 21666615 (-) |
| G2212908 | LOC106613883 | other | upstream | 1195303 | 21907963 ~ 21910736 (-) |
| LOC110521564 | LOC106584326 | other | upstream | 2273699 | 22982517 ~ 23008109 (-) |
| G2213654 | NA | other | upstream | 2465846 | 23178506 ~ 23179611 (-) |
