G2210053


Basic Information

Item Value
gene id G2210053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 20844154 ~ 20909765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2528341
gggaaaaaattctggttcatcctttggagaaatttccaaacacatgaaggtaccacgttcatctgtacaaacaatagtacgaaagtataaacaccatgggaccacacagccgtcataatGCTCAGGagggagatgcattctgtctcctagagatgaacgtactttggtgcgaaaagtgcaaataaatcccagaacaacagcaaaggaccttgtgaagatgctggaggaaacaggtacaaaagtatctatatccacagtaaaacgagtcctatatcaacataacctgaaaggctgctcagcaaggaagaagccactgctccaaaaccgccataaaaaaacagactacagttagcaactgcacatgggaacaaatatcgtactttttggagaaatgtcctctggtctgatgaaacaaaatagaactgtttggccataatgaccatcgttatgtttggaggaaaaagggggaggcttgcaagccgaagaacaccatcccaaccgtgaagcacggggtggtagcatcatgttgttggggtgctttgctgcaggagggactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2528341 True 557 lncRNA 0.44 2 20844154 20909765
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110521533 rp21 coding upstream 126594 20714375 ~ 20717560 (+)
trnav-cac-90 NA coding upstream 139047 20705035 ~ 20705107 (+)
trnav-aac-157 NA coding upstream 141437 20702645 ~ 20702717 (+)
trnag-gcc-20 NA coding upstream 144275 20699809 ~ 20699879 (+)
trnag-gcc-19 NA coding upstream 147151 20696933 ~ 20697003 (+)
LOC110521537 LOC106613872 coding downstream 32595 20942360 ~ 21124565 (+)
LOC110521538 LOC106584348 coding downstream 358607 21268372 ~ 21271696 (+)
LOC110521540 LOC106584347 coding downstream 363966 21273731 ~ 21290307 (+)
LOC110521541 LOC106584346 coding downstream 381535 21291300 ~ 21296626 (+)
ttc14 ttc14 coding downstream 392313 21302078 ~ 21307164 (+)
G2210046 NA non-coding upstream 12486 20831466 ~ 20831668 (+)
G2210042 NA non-coding upstream 16177 20827282 ~ 20827977 (+)
G2210041 NA non-coding upstream 16971 20826931 ~ 20827183 (+)
G2210039 NA non-coding upstream 19182 20824350 ~ 20824972 (+)
G2210038 NA non-coding upstream 19862 20823987 ~ 20824292 (+)
G2210226 NA non-coding downstream 158279 21068044 ~ 21068365 (+)
G2210245 NA non-coding downstream 196187 21105952 ~ 21112063 (+)
G2210345 NA non-coding downstream 347749 21257514 ~ 21258012 (+)
G2210377 NA non-coding downstream 420844 21330609 ~ 21331047 (+)
G2209830 NA other upstream 392562 20451162 ~ 20451592 (+)
LOC118945811 NA other upstream 1125499 19709234 ~ 19719196 (+)
LOC110520949 NA other upstream 1858778 18983689 ~ 18985409 (+)
LOC110521476 LOC106584398 other upstream 2039367 18799791 ~ 18805126 (+)
G2206982 NA other upstream 3363062 17480709 ~ 17481092 (+)
G2211556 NA other downstream 749885 21659650 ~ 21663839 (+)
G2212455 LOC106584324 other downstream 2140723 23050488 ~ 23051858 (+)
G2212563 LOC106584318 other downstream 2299010 23208775 ~ 23210516 (+)
G2213751 NA other downstream 2439234 23348999 ~ 23349217 (+)

Expression

G2210053 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
End of interactive chart.

G2210053 Expression in each Bioproject

Bar chart with 21 bars.
G2210053 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network