Gene
RNA
| Item | Value |
|---|---|
| gene id | G2217031 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 25899224 ~ 25899854 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2535899 | True | 631 | lncRNA | 0.39 | 1 | 25899224 | 25899854 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521613 | LOC106584281 | coding | upstream | 44864 | 25832288 ~ 25854360 (+) |
| LOC110521611 | LOC106584283 | coding | upstream | 73721 | 25688091 ~ 25825503 (+) |
| trnaa-agc-10 | NA | coding | upstream | 115057 | 25784095 ~ 25784167 (+) |
| LOC110521610 | NA | coding | upstream | 211268 | 25682300 ~ 25687956 (+) |
| LOC110521607 | LOC106584286 | coding | upstream | 245319 | 25636582 ~ 25653905 (+) |
| LOC110521618 | LOC106584277 | coding | downstream | 244295 | 26144149 ~ 26149802 (+) |
| si:dkey-239i20.4 | LOC106584276 | coding | downstream | 256031 | 26155885 ~ 26170182 (+) |
| LOC110521621 | LOC106584275 | coding | downstream | 273494 | 26173348 ~ 26192262 (+) |
| LOC110521622 | prrc2c | coding | downstream | 302385 | 26202239 ~ 26252093 (+) |
| LOC110521623 | vamp4 | coding | downstream | 358083 | 26257937 ~ 26282393 (+) |
| LOC110521605 | NA | non-coding | upstream | 472350 | 25412311 ~ 25426874 (+) |
| G2216336 | tgm1 | non-coding | upstream | 521991 | 25314529 ~ 25377233 (+) |
| G2216355 | NA | non-coding | upstream | 543272 | 25350845 ~ 25355952 (+) |
| G2216348 | rabggta | non-coding | upstream | 557623 | 25339829 ~ 25341601 (+) |
| G2217047 | NA | non-coding | downstream | 17122 | 25916976 ~ 25917700 (+) |
| LOC110521625 | mettl13 | non-coding | downstream | 413626 | 26312180 ~ 26314731 (+) |
| G2217277 | NA | non-coding | downstream | 418287 | 26318141 ~ 26324770 (+) |
| G2217304 | NA | non-coding | downstream | 473947 | 26373801 ~ 26398614 (+) |
| G2217315 | NA | non-coding | downstream | 491055 | 26390909 ~ 26391160 (+) |
| LOC110522768 | LOC106584287 | other | upstream | 310709 | 25566527 ~ 25590680 (+) |
| G2216357 | NA | other | upstream | 525614 | 25364252 ~ 25373610 (+) |
| G2216024 | LOC106584303 | other | upstream | 785626 | 25030998 ~ 25174051 (+) |
| LOC110521578 | LOC106584313 | other | upstream | 2313644 | 23510569 ~ 23610545 (+) |
| G2217159 | LOC106584278 | other | downstream | 227200 | 26127054 ~ 26133044 (+) |
| G2217442 | NA | other | downstream | 707669 | 26607523 ~ 26607943 (+) |
| LOC110521633 | LOC106584207 | other | downstream | 822131 | 26695809 ~ 26795605 (+) |
| G2218483 | NA | other | downstream | 1325520 | 27225374 ~ 27226305 (+) |
| LOC110521646 | LOC106584219 | other | downstream | 1598023 | 27497328 ~ 27519290 (+) |
