G2217540


Basic Information

Item Value
gene id G2217540
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 26841151 ~ 26845834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2536449
ACATGACTGTTGACAAGCACGCAACTTAACTCTTTACTTTGCCGAATGTGCCGACGCCCAGAGTGTCTCCTAAGAGatggtagcgaggtgaacaggccgtggcttgggtggctgatgacctttttggccttcctgtgacaccgggtgctgtagatgtcttggagggcaggcagtgtgcccccgtcGGGCTTGACCtcacaccctctggagagccctgtggttgtggttggtgcaattgccataccaggtgtcggtacagcctgacaggatgctctcaatggtacaaagccaaatttcttcagcctcctgagattgaataGGCACGGTTGCGCAGTCTTCACCACATTGTCAGTGTGAAGGCACCATTTCAGGtcgtcagtgatgtgcacgcagaggaacttgaagcttttgactgTTTTAAAACATTTGGCAAATAAATTGGAAATGAAAACAAACGTTTCTTTTCACACATTCAGATACACCCATTTCACTCAATTTCTGGGCGTTTTCTCCCATTTCATGCCAACTGGACACGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2536449 True 537 lncRNA 0.50 2 26841151 26845834

Neighbor

gene id symbol gene type direction distance location
LOC110521632 LOC106584206 coding upstream 18819 26796202 ~ 26822332 (+)
LOC110521633 LOC106584207 coding upstream 45546 26695809 ~ 26795605 (+)
oma1 oma1 coding upstream 339599 26477035 ~ 26501552 (+)
LOC110521630 mysm1 coding upstream 362750 26457805 ~ 26478401 (+)
LOC110521629 LOC106584269 coding upstream 383432 26446447 ~ 26457719 (+)
plpp3 plpp3 coding downstream 1589 26847423 ~ 26906418 (+)
usp24 usp24 coding downstream 178104 27023938 ~ 27076744 (+)
dhcr24 dhcr24 coding downstream 253983 27099817 ~ 27122682 (+)
LOC110521639 tmm27 coding downstream 297171 27143005 ~ 27145888 (+)
LOC110522772 NA coding downstream 301518 27147352 ~ 27156672 (+)
G2217527 NA non-coding upstream 25543 26814058 ~ 26815608 (+)
G2217518 NA non-coding upstream 70057 26770051 ~ 26771094 (+)
G2217517 NA non-coding upstream 70885 26769395 ~ 26770266 (+)
G2217392 NA non-coding upstream 83784 26749541 ~ 26757367 (+)
G2217567 NA non-coding downstream 67629 26913463 ~ 26913791 (+)
G2217571 NA non-coding downstream 72177 26918011 ~ 26918225 (+)
G2217579 NA non-coding downstream 91229 26937063 ~ 26937266 (+)
G2217588 NA non-coding downstream 102116 26947950 ~ 26948189 (+)
G2217589 NA non-coding downstream 102401 26948235 ~ 26949044 (+)
G2217442 NA other upstream 233208 26607523 ~ 26607943 (+)
G2217159 LOC106584278 other upstream 708107 26127054 ~ 26133044 (+)
LOC110521611 LOC106584283 other upstream 1028845 25688091 ~ 25825503 (+)
LOC110522768 LOC106584287 other upstream 1252636 25566527 ~ 25590680 (+)
G2218483 NA other downstream 379540 27225374 ~ 27226305 (+)
LOC110521646 LOC106584219 other downstream 652043 27497328 ~ 27519290 (+)
LOC110521656 LOC106584103 other downstream 992074 27823914 ~ 27844041 (+)
fip1l1a fip1l1 other downstream 1448061 28260830 ~ 28307538 (+)
G2219989 LOC105940532 other downstream 1701704 28547538 ~ 28548084 (+)

Expression


Co-expression Network