G2217579


Basic Information

Item Value
gene id G2217579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 26937063 ~ 26937266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2536490
ACATGGATAAAATAGTGAGTATCAGTAGATCAGAGTAAGTAAACAAAAATACCAATATGACAGGGCTTCAGATGCTGGTTCAATTTTGATATGGGGATGGTTAAGTCAAAGATACTACAGCACTGACAGTCACAGAGGCCTACTTACCGTTCACCCCTATCAGCCCAGAGCGCACAGAGAGAGAATATACTAAAGATCAGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2536490 True 204 lncRNA 0.41 1 26937063 26937266

Neighbor

gene id symbol gene type direction distance location
plpp3 plpp3 coding upstream 30645 26847423 ~ 26906418 (+)
LOC110521632 LOC106584206 coding upstream 114731 26796202 ~ 26822332 (+)
LOC110521633 LOC106584207 coding upstream 141458 26695809 ~ 26795605 (+)
oma1 oma1 coding upstream 435511 26477035 ~ 26501552 (+)
LOC110521630 mysm1 coding upstream 458662 26457805 ~ 26478401 (+)
usp24 usp24 coding downstream 86672 27023938 ~ 27076744 (+)
dhcr24 dhcr24 coding downstream 162551 27099817 ~ 27122682 (+)
LOC110521639 tmm27 coding downstream 205739 27143005 ~ 27145888 (+)
LOC110522772 NA coding downstream 210086 27147352 ~ 27156672 (+)
LOC110521646 LOC106584219 coding downstream 560062 27497328 ~ 27519290 (+)
G2217571 NA non-coding upstream 18838 26918011 ~ 26918225 (+)
G2217567 NA non-coding upstream 23272 26913463 ~ 26913791 (+)
G2217540 NA non-coding upstream 91229 26841151 ~ 26845834 (+)
G2217527 NA non-coding upstream 121455 26814058 ~ 26815608 (+)
G2217518 NA non-coding upstream 165969 26770051 ~ 26771094 (+)
G2217588 NA non-coding downstream 10684 26947950 ~ 26948189 (+)
G2217589 NA non-coding downstream 10969 26948235 ~ 26949044 (+)
G2217389 NA non-coding downstream 13849 26951115 ~ 26951578 (+)
G2217598 NA non-coding downstream 26209 26963475 ~ 26963767 (+)
G2217600 NA non-coding downstream 27420 26964686 ~ 26964904 (+)
G2217442 NA other upstream 329120 26607523 ~ 26607943 (+)
G2217159 LOC106584278 other upstream 804019 26127054 ~ 26133044 (+)
LOC110521611 LOC106584283 other upstream 1124757 25688091 ~ 25825503 (+)
LOC110522768 LOC106584287 other upstream 1348548 25566527 ~ 25590680 (+)
G2218483 NA other downstream 288108 27225374 ~ 27226305 (+)
LOC110521656 LOC106584103 other downstream 900642 27823914 ~ 27844041 (+)
fip1l1a fip1l1 other downstream 1356629 28260830 ~ 28307538 (+)
G2219989 LOC105940532 other downstream 1610272 28547538 ~ 28548084 (+)

Expression


Co-expression Network