G2217598


Basic Information

Item Value
gene id G2217598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 26963475 ~ 26963767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2536514
atctcgcacaaattatcaatgaacctaccaggtacctccccaaagccttaaacacgggcaccctcatagatatcatcctaaccaacttcccctctaaatacacctctgctgtcttcaaccaagatctcagcgatcactgcctcattgcctgcatccgtaatgggtcagcggtcaaacgacctcctctcatcactgtaaaacgctccctgaaacacttcagcgagcaggcctttctaatcaacctggccggggtatcctggaaggatattgacctcatcccgtcagtagaggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2536514 True 293 lncRNA 0.49 1 26963475 26963767

Neighbor

gene id symbol gene type direction distance location
plpp3 plpp3 coding upstream 57057 26847423 ~ 26906418 (+)
LOC110521632 LOC106584206 coding upstream 141143 26796202 ~ 26822332 (+)
LOC110521633 LOC106584207 coding upstream 167870 26695809 ~ 26795605 (+)
oma1 oma1 coding upstream 461923 26477035 ~ 26501552 (+)
LOC110521630 mysm1 coding upstream 485074 26457805 ~ 26478401 (+)
usp24 usp24 coding downstream 60171 27023938 ~ 27076744 (+)
dhcr24 dhcr24 coding downstream 136050 27099817 ~ 27122682 (+)
LOC110521639 tmm27 coding downstream 179238 27143005 ~ 27145888 (+)
LOC110522772 NA coding downstream 183585 27147352 ~ 27156672 (+)
LOC110521646 LOC106584219 coding downstream 533561 27497328 ~ 27519290 (+)
G2217389 NA non-coding upstream 11897 26951115 ~ 26951578 (+)
G2217589 NA non-coding upstream 14431 26948235 ~ 26949044 (+)
G2217588 NA non-coding upstream 15286 26947950 ~ 26948189 (+)
G2217579 NA non-coding upstream 26209 26937063 ~ 26937266 (+)
G2217571 NA non-coding upstream 45250 26918011 ~ 26918225 (+)
G2217600 NA non-coding downstream 919 26964686 ~ 26964904 (+)
G2217601 NA non-coding downstream 1885 26965652 ~ 26966145 (+)
G2218192 NA non-coding downstream 8498 26972265 ~ 26972568 (+)
G2218316 LOC106584215 non-coding downstream 222808 27186575 ~ 27196779 (+)
G2217442 NA other upstream 355532 26607523 ~ 26607943 (+)
G2217159 LOC106584278 other upstream 830431 26127054 ~ 26133044 (+)
LOC110521611 LOC106584283 other upstream 1151169 25688091 ~ 25825503 (+)
LOC110522768 LOC106584287 other upstream 1374960 25566527 ~ 25590680 (+)
G2218483 NA other downstream 261607 27225374 ~ 27226305 (+)
LOC110521656 LOC106584103 other downstream 874141 27823914 ~ 27844041 (+)
fip1l1a fip1l1 other downstream 1330128 28260830 ~ 28307538 (+)
G2219989 LOC105940532 other downstream 1583771 28547538 ~ 28548084 (+)

Expression


Co-expression Network