Gene
RNA
| Item | Value |
|---|---|
| gene id | G2218553 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 27278240 ~ 27278449 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2537571 | True | 210 | lncRNA | 0.37 | 1 | 27278240 | 27278449 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522772 | NA | coding | upstream | 121568 | 27147352 ~ 27156672 (+) |
| LOC110521639 | tmm27 | coding | upstream | 132352 | 27143005 ~ 27145888 (+) |
| dhcr24 | dhcr24 | coding | upstream | 155558 | 27099817 ~ 27122682 (+) |
| usp24 | usp24 | coding | upstream | 201496 | 27023938 ~ 27076744 (+) |
| plpp3 | plpp3 | coding | upstream | 371822 | 26847423 ~ 26906418 (+) |
| LOC110521646 | LOC106584219 | coding | downstream | 218879 | 27497328 ~ 27519290 (+) |
| LOC110521647 | LOC106560251 | coding | downstream | 243156 | 27521605 ~ 27537511 (+) |
| LOC110522774 | NA | coding | downstream | 261571 | 27540020 ~ 27540985 (+) |
| LOC118945773 | nek1 | coding | downstream | 289368 | 27567817 ~ 27571386 (+) |
| LOC118945810 | nek1 | coding | downstream | 293265 | 27571714 ~ 27581860 (+) |
| G2218507 | NA | non-coding | upstream | 34448 | 27243592 ~ 27243792 (+) |
| G2218484 | NA | non-coding | upstream | 51181 | 27226363 ~ 27227059 (+) |
| G2218482 | NA | non-coding | upstream | 53117 | 27222870 ~ 27225123 (+) |
| G2218332 | NA | non-coding | upstream | 67380 | 27210661 ~ 27210860 (+) |
| G2218316 | LOC106584215 | non-coding | upstream | 81461 | 27186575 ~ 27196779 (+) |
| G2218801 | NA | non-coding | downstream | 221854 | 27500303 ~ 27501159 (+) |
| G2218823 | LOC106584220 | non-coding | downstream | 285362 | 27563811 ~ 27565177 (+) |
| G2218907 | LOC106560254 | non-coding | downstream | 411863 | 27690312 ~ 27692184 (+) |
| G2218953 | NA | non-coding | downstream | 469624 | 27748073 ~ 27754271 (+) |
| G2218483 | NA | other | upstream | 51935 | 27225374 ~ 27226305 (+) |
| LOC110521633 | LOC106584207 | other | upstream | 525776 | 26695809 ~ 26795605 (+) |
| G2217442 | NA | other | upstream | 670297 | 26607523 ~ 26607943 (+) |
| G2217159 | LOC106584278 | other | upstream | 1145196 | 26127054 ~ 26133044 (+) |
| LOC110521611 | LOC106584283 | other | upstream | 1465934 | 25688091 ~ 25825503 (+) |
| LOC110521656 | LOC106584103 | other | downstream | 559459 | 27823914 ~ 27844041 (+) |
| fip1l1a | fip1l1 | other | downstream | 1015446 | 28260830 ~ 28307538 (+) |
| G2219989 | LOC105940532 | other | downstream | 1269089 | 28547538 ~ 28548084 (+) |
| G2219991 | NA | other | downstream | 1270580 | 28549029 ~ 28549478 (+) |
