G2219005


Basic Information

Item Value
gene id G2219005
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 27815522 ~ 27815767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2538082
TAaccaaagtttatctcaatactttgttatataccctttgttggcaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcttccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacatggactttcaactccctccaaagattttctacggggttgaaatctggagactggctaggccactccaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2538082 True 246 lncRNA 0.44 1 27815522 27815767

Neighbor

gene id symbol gene type direction distance location
LOC110521654 cbr4 coding upstream 130252 27672920 ~ 27685270 (+)
LOC110521651 LOC106584225 coding upstream 153174 27608444 ~ 27662348 (+)
LOC118945810 nek1 coding upstream 233662 27571714 ~ 27581860 (+)
LOC118945773 nek1 coding upstream 244136 27567817 ~ 27571386 (+)
LOC110522774 NA coding upstream 274537 27540020 ~ 27540985 (+)
LOC110521656 LOC106584103 coding downstream 8147 27823914 ~ 27844041 (+)
LOC110521658 LOC106584105 coding downstream 36038 27851805 ~ 27855190 (+)
LOC100136720 zar1 coding downstream 39597 27855364 ~ 27856930 (+)
LOC110521659 LOC106584107 coding downstream 147140 27962907 ~ 27971343 (+)
spata18 spata18 coding downstream 174748 27990515 ~ 27997891 (+)
G2219003 NA non-coding upstream 3720 27811564 ~ 27811802 (+)
G2219002 NA non-coding upstream 5178 27809664 ~ 27810344 (+)
G2218953 NA non-coding upstream 61251 27748073 ~ 27754271 (+)
G2218907 LOC106560254 non-coding upstream 123338 27690312 ~ 27692184 (+)
G2218823 LOC106584220 non-coding upstream 250345 27563811 ~ 27565177 (+)
G2219006 NA non-coding downstream 954 27816721 ~ 27816920 (+)
G2219026 NA non-coding downstream 34869 27850636 ~ 27850965 (+)
G2218968 NA non-coding downstream 41370 27857137 ~ 27858979 (+)
G2219070 NA non-coding downstream 132746 27948513 ~ 27948725 (+)
LOC110521646 LOC106584219 other upstream 312842 27497328 ~ 27519290 (+)
G2218483 NA other upstream 589217 27225374 ~ 27226305 (+)
LOC110521633 LOC106584207 other upstream 1063058 26695809 ~ 26795605 (+)
G2217442 NA other upstream 1207579 26607523 ~ 26607943 (+)
G2217159 LOC106584278 other upstream 1682478 26127054 ~ 26133044 (+)
fip1l1a fip1l1 other downstream 478128 28260830 ~ 28307538 (+)
G2219989 LOC105940532 other downstream 731771 28547538 ~ 28548084 (+)
G2219991 NA other downstream 733262 28549029 ~ 28549478 (+)
G2220253 NA other downstream 1205819 29021586 ~ 29021882 (+)

Expression


Co-expression Network