G2219070


Basic Information

Item Value
gene id G2219070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 27948513 ~ 27948725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2538157
accctgggtttataagccccagggtcgttacaatatctGCATCAAGATAGAACAAGGCTTGACGGAAAAAATGGCGTCCCTTGAGAGGGCAAAAAttagatgtacagtaccagtcaaaagtttggacacacctaattcaagggtttttatttatttgtagtattttctacattgtagaataatagtgaaaacatcaaatcTAAGAAACaacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2538157 True 213 lncRNA 0.37 1 27948513 27948725

Neighbor

gene id symbol gene type direction distance location
LOC100136720 zar1 coding upstream 91583 27855364 ~ 27856930 (+)
LOC110521658 LOC106584105 coding upstream 93926 27851805 ~ 27855190 (+)
LOC110521656 LOC106584103 coding upstream 104472 27823914 ~ 27844041 (+)
LOC110522775 NA coding upstream 125645 27801294 ~ 27822868 (+)
LOC110521654 cbr4 coding upstream 263243 27672920 ~ 27685270 (+)
LOC110521659 LOC106584107 coding downstream 14182 27962907 ~ 27971343 (+)
spata18 spata18 coding downstream 41790 27990515 ~ 27997891 (+)
LOC110521663 rasl11b coding downstream 144642 28093367 ~ 28096082 (+)
fip1l1a fip1l1 coding downstream 312105 28260830 ~ 28307538 (+)
gsx2 gsx2 coding downstream 583230 28531955 ~ 28533455 (+)
G2218968 NA non-coding upstream 89534 27857137 ~ 27858979 (+)
G2219026 NA non-coding upstream 97548 27850636 ~ 27850965 (+)
G2219006 NA non-coding upstream 131593 27816721 ~ 27816920 (+)
G2219005 NA non-coding upstream 132746 27815522 ~ 27815767 (+)
G2219075 NA non-coding downstream 34906 27983631 ~ 27986339 (+)
G2219228 NA non-coding downstream 285208 28233933 ~ 28247795 (+)
G2219302 lnx1 non-coding downstream 387214 28335939 ~ 28337968 (+)
G2219327 NA non-coding downstream 421922 28370647 ~ 28371013 (+)
G2219964 NA non-coding downstream 566244 28514969 ~ 28539699 (+)
LOC110521646 LOC106584219 other upstream 445833 27497328 ~ 27519290 (+)
G2218483 NA other upstream 722208 27225374 ~ 27226305 (+)
LOC110521633 LOC106584207 other upstream 1196049 26695809 ~ 26795605 (+)
G2217442 NA other upstream 1340570 26607523 ~ 26607943 (+)
G2219989 LOC105940532 other downstream 598813 28547538 ~ 28548084 (+)
G2219991 NA other downstream 600304 28549029 ~ 28549478 (+)
G2220253 NA other downstream 1072861 29021586 ~ 29021882 (+)
LOC110521703 LOC106584150 other downstream 2915099 30863624 ~ 30866524 (+)

Expression


Co-expression Network