G2220025


Basic Information

Item Value
gene id G2220025
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 28602635 ~ 28602844 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2539202
ggaagacatacaagaccactgataatctccctcgatctggggctccacgcaagatcttaccccgtggggtcaaaatgatcacaagaacggtgagcaaaaatcccagaaccacacggggtgtgaatgacctgcagagagctgggaccaaagtaacaaagtctaccataagtaacacactacgccgccagggactcaaatcctgcagtgcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2539202 True 210 lncRNA 0.51 1 28602635 28602844

Neighbor

gene id symbol gene type direction distance location
pdgfra pdgfra coding upstream 25993 28555383 ~ 28576642 (+)
gsx2 gsx2 coding upstream 69180 28531955 ~ 28533455 (+)
fip1l1a fip1l1 coding upstream 295097 28260830 ~ 28307538 (+)
LOC110521663 rasl11b coding upstream 506553 28093367 ~ 28096082 (+)
spata18 spata18 coding upstream 604744 27990515 ~ 27997891 (+)
LOC110521672 kit coding downstream 25072 28627916 ~ 28667914 (+)
srd5a3 srd5a3 coding downstream 162519 28765363 ~ 28768625 (+)
tmem165 LOC106584122 coding downstream 166388 28769232 ~ 28774166 (+)
exoc1 exoc1 coding downstream 308721 28911565 ~ 28925770 (+)
cep135 cep135 coding downstream 323142 28925986 ~ 28944771 (+)
G2219990 NA non-coding upstream 53718 28548400 ~ 28548917 (+)
G2219984 NA non-coding upstream 60729 28541588 ~ 28541906 (+)
G2219983 NA non-coding upstream 61234 28541165 ~ 28541401 (+)
G2219964 NA non-coding upstream 62936 28514969 ~ 28539699 (+)
G2219327 NA non-coding upstream 231622 28370647 ~ 28371013 (+)
G2220026 NA non-coding downstream 3425 28606269 ~ 28606599 (+)
G2220031 NA non-coding downstream 11075 28613919 ~ 28614126 (+)
G2220223 NA non-coding downstream 349239 28952083 ~ 28952436 (+)
G2220224 NA non-coding downstream 349749 28952593 ~ 28953950 (+)
G2220225 NA non-coding downstream 351380 28954224 ~ 28954455 (+)
G2219991 NA other upstream 53157 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 54551 28547538 ~ 28548084 (+)
LOC110521656 LOC106584103 other upstream 758937 27823914 ~ 27844041 (+)
LOC110521646 LOC106584219 other upstream 1099955 27497328 ~ 27519290 (+)
G2220253 NA other downstream 418742 29021586 ~ 29021882 (+)
LOC110521703 LOC106584150 other downstream 2260980 30863624 ~ 30866524 (+)
G2225948 NA other downstream 4969296 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 6579125 35181902 ~ 35190209 (+)
G2228777 NA other downstream 6915390 35518234 ~ 35519242 (+)

Expression


Co-expression Network