G2220031


Basic Information

Item Value
gene id G2220031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 28613919 ~ 28614126 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2539208
aaacatacagtcaataataaagtagaacaaaagaaaacaaaaagtatgtatacagtgagtgcaaatgaggtacgttaaggaaataaataggccatggtggcgaagtaattacaatatagcaattaaacactggaatggtagatcagcagaagatgaatgtgcaggtagagatactggggtgcaaaggagcaaaataaataaataaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2539208 True 208 lncRNA 0.33 1 28613919 28614126

Neighbor

gene id symbol gene type direction distance location
pdgfra pdgfra coding upstream 37277 28555383 ~ 28576642 (+)
gsx2 gsx2 coding upstream 80464 28531955 ~ 28533455 (+)
fip1l1a fip1l1 coding upstream 306381 28260830 ~ 28307538 (+)
LOC110521663 rasl11b coding upstream 517837 28093367 ~ 28096082 (+)
spata18 spata18 coding upstream 616028 27990515 ~ 27997891 (+)
LOC110521672 kit coding downstream 13790 28627916 ~ 28667914 (+)
srd5a3 srd5a3 coding downstream 151237 28765363 ~ 28768625 (+)
tmem165 LOC106584122 coding downstream 155106 28769232 ~ 28774166 (+)
exoc1 exoc1 coding downstream 297439 28911565 ~ 28925770 (+)
cep135 cep135 coding downstream 311860 28925986 ~ 28944771 (+)
G2220026 NA non-coding upstream 7320 28606269 ~ 28606599 (+)
G2220025 NA non-coding upstream 11075 28602635 ~ 28602844 (+)
G2219990 NA non-coding upstream 65002 28548400 ~ 28548917 (+)
G2219984 NA non-coding upstream 72013 28541588 ~ 28541906 (+)
G2219983 NA non-coding upstream 72518 28541165 ~ 28541401 (+)
G2220223 NA non-coding downstream 337957 28952083 ~ 28952436 (+)
G2220224 NA non-coding downstream 338467 28952593 ~ 28953950 (+)
G2220225 NA non-coding downstream 340098 28954224 ~ 28954455 (+)
G2220229 NA non-coding downstream 343009 28957135 ~ 28957485 (+)
G2220235 aasdh non-coding downstream 366366 28980492 ~ 28980755 (+)
G2219991 NA other upstream 64441 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 65835 28547538 ~ 28548084 (+)
LOC110521656 LOC106584103 other upstream 770221 27823914 ~ 27844041 (+)
LOC110521646 LOC106584219 other upstream 1111239 27497328 ~ 27519290 (+)
G2220253 NA other downstream 407460 29021586 ~ 29021882 (+)
LOC110521703 LOC106584150 other downstream 2249698 30863624 ~ 30866524 (+)
G2225948 NA other downstream 4958014 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 6567843 35181902 ~ 35190209 (+)
G2228777 NA other downstream 6904108 35518234 ~ 35519242 (+)

Expression


Co-expression Network