G2220957


Basic Information

Item Value
gene id G2220957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 29575885 ~ 29576118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2540236
GTACCgctacaccctgtatatagccttgttattttaatttcttgtgttacttttttttgttgtgttactttaGTTCATTTAGgacatattttcttaactctatttcttcaactgcattgttggttaagggcatgtaagtaagcatttcacggtaaggtctacacctgttgtattcggcgcatgtgacaaataacattacaTTTCTTTAGAACTCGACTGTACGgaactctactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2540236 True 234 lncRNA 0.35 1 29575885 29576118

Neighbor

gene id symbol gene type direction distance location
LOC110521691 LOC106584140 coding upstream 271945 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 422181 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 574393 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 587310 28983183 ~ 28988575 (+)
cracd kiaa1211 coding upstream 598208 28949396 ~ 28977677 (+)
LOC110521693 LOC106584143 coding downstream 22432 29598550 ~ 29604909 (+)
LOC110521700 NA coding downstream 960118 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 1270563 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 1282720 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 1287506 30863624 ~ 30866524 (+)
G2220937 NA non-coding upstream 35600 29538068 ~ 29540285 (+)
G2220856 LOC106584141 non-coding upstream 48753 29413156 ~ 29527132 (+)
G2220823 NA non-coding upstream 164948 29351574 ~ 29410937 (+)
G2220773 NA non-coding upstream 243919 29310575 ~ 29331966 (+)
G2220774 NA non-coding upstream 255523 29308112 ~ 29320362 (+)
G2220960 NA non-coding downstream 8751 29584869 ~ 29585073 (+)
G2221272 NA non-coding downstream 53906 29630024 ~ 29630244 (+)
G2221279 NA non-coding downstream 58735 29634853 ~ 29639083 (+)
G2221307 NA non-coding downstream 96199 29672317 ~ 29691242 (+)
G2221345 NA non-coding downstream 160305 29736423 ~ 29736626 (+)
G2220253 NA other upstream 554003 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1026407 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1027801 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 1268559 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 1732187 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3996022 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 5605851 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5942116 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 6117192 35693310 ~ 35735400 (+)

Expression


Co-expression Network