G2221272


Basic Information

Item Value
gene id G2221272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 29630024 ~ 29630244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2540566
gtcttacagtatgtagcaacattttaacttctgttttttgcattggataaaaGTATAGACTACAAAATAgtttatcatacactgcatttgcggaaacaatgggaaagtaattctgatatgaaagttgatcaacttgtaaactcacttttgagaaaaccgtCTTTCAAAGTTTTGGTCCTACTATTGGAGAACCCTTATTTGTCTTTACCCATTCAGCATTg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2540566 True 221 lncRNA 0.33 1 29630024 29630244

Neighbor

gene id symbol gene type direction distance location
LOC110521693 LOC106584143 coding upstream 25115 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 326084 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 476320 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 628532 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 641449 28983183 ~ 28988575 (+)
LOC110521700 NA coding downstream 905992 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 1216437 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 1228594 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 1233380 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 1248442 30878686 ~ 30880955 (+)
G2220960 NA non-coding upstream 44951 29584869 ~ 29585073 (+)
G2220957 NA non-coding upstream 53906 29575885 ~ 29576118 (+)
G2220937 NA non-coding upstream 89739 29538068 ~ 29540285 (+)
G2220856 LOC106584141 non-coding upstream 102892 29413156 ~ 29527132 (+)
G2220823 NA non-coding upstream 219087 29351574 ~ 29410937 (+)
G2221279 NA non-coding downstream 4609 29634853 ~ 29639083 (+)
G2221307 NA non-coding downstream 42073 29672317 ~ 29691242 (+)
G2221345 NA non-coding downstream 106179 29736423 ~ 29736626 (+)
G2221420 NA non-coding downstream 111862 29742106 ~ 29742737 (+)
G2221437 NA non-coding downstream 126200 29756444 ~ 29756803 (+)
G2220253 NA other upstream 608142 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1080546 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1081940 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 1322698 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 1786326 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3941896 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 5551725 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5887990 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 6063066 35693310 ~ 35735400 (+)

Expression


Co-expression Network