G2221307


Basic Information

Item Value
gene id G2221307
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 29672317 ~ 29691242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2540602
GCTTTTCGAAAGACTCTTTCCACCTCATGCATTCTTCCAGAGTAGGTCTAGTTTTGCCTATTTTGCAGCTTGATAGACTCCAGTTTGATTTTTGCAGAAAGTTGACCATTCTTGATTTCAGTTCCTTGGCCCTAAGAAGAGAGAATAATATCATAGGTAAGATAAATAATGCACAAGTCCTTGAATTGAGTCCTTGTTCAGTACAATATTTTGATACTAACTAGTCATTAACAAATCGAGAcatgtctcatcgctgcaagGTCTAAATTTAGAATCCACTAAAACCGCCTTCACTTTCATCATCACAGAAGCTGGAAAGCCAAATAATAATCCCCTTTAATCCTTTAATCCAAATGCCAGAGACAGCGACAGTGAAGAGTTGTATGTACCTTTCTAGGCAGGTGGAAGACAGAGCTAGTCCTTTGCACATAGTTGATGTGGATGCAGAGAGCGAATATTCCCCTCCATCTGTAGTGGCAACATGGCTCAACGTGATGAGTTTGGGAGCCTCAGGTTGACCATCTGCCTGACAGTTCTCAGGGGAAAAGGGGAAGAGCGGAAGGGAAGAGGTGGAGGAACCAACAGATGCTGCCTAGGCCTTGTTACACACTGTACTACTCCACCGGGACAGGCAATACAACCTCTGTCTCACCATCAACTGAAGGCCAACTTCAATCAAACACACTTTGCTATGTACTGGAAGTGGCATATGTAATATATGATGTAATGTTACGGAGTGCTGGGAAATCACTAGGGTGACACACCATGTACGCTTACAGCATTCAAAAGAAGCTGTGTGAGCAAGGCATGAATGTCCATGTGAATATAGACTAGTAAAAACATTGCTGCGGTAGGTTTGATTGCCATATAGGGCCCTGAGAGCCATCCCAGACCTGCAATAATgcatttattgtatttatttttatttaactaggcaagtcagttaagaacaaattcttatttacaatgatggcctacaccggcaaaacccagacgacgctgggtcaattgtgctcTGCCCTATGGGACTACGAATCATGTCTAGTTGTGACacagtctggattcgaaccagggtgtcatagtgacacctcaagcactgagatgcagtgccttagactgcttcGCCACTTGGGTGCCCAATAAGCTGCATTCCCATCATACACACTCTGAAAAAGTAAATATTCCATTGACATCACATGAACACTACAGACTTTAATATCACAATCAATCAGAGATAGTGGCCCCAATGTCCCTAATGCTTGTCTCCGACAGGACATGTTGCTATGCAAGTTCCATGTGTGTCGCAGAATCCTTTCATAGCATACTGACTGGGCTGAGACAGTATCTCTGTGACTGCATTGTCCTGTAATGTGATGATTGTTTTGTCTGTTTTATTGTCCTGTGATAAACTATTTCACAGCTCCTCAGCCTCAGAGGAGGGACTGAGTTTGACTAGGTTCCAGTAATGTGACGATTGT

Function

NR:

description
regulator of G-protein signaling 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2540602 True 1478 lncRNA 0.43 2 29672317 29691242

Neighbor

gene id symbol gene type direction distance location
LOC110521693 LOC106584143 coding upstream 67408 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 368377 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 518613 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 670825 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 683742 28983183 ~ 28988575 (+)
LOC110521700 NA coding downstream 844994 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 1155439 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 1167596 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 1172382 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 1187444 30878686 ~ 30880955 (+)
G2221279 NA non-coding upstream 33234 29634853 ~ 29639083 (+)
G2221272 NA non-coding upstream 42073 29630024 ~ 29630244 (+)
G2220960 NA non-coding upstream 87244 29584869 ~ 29585073 (+)
G2220957 NA non-coding upstream 96199 29575885 ~ 29576118 (+)
G2220937 NA non-coding upstream 132032 29538068 ~ 29540285 (+)
G2221345 NA non-coding downstream 45181 29736423 ~ 29736626 (+)
G2221420 NA non-coding downstream 50864 29742106 ~ 29742737 (+)
G2221437 NA non-coding downstream 65202 29756444 ~ 29756803 (+)
G2221474 NA non-coding downstream 88129 29779371 ~ 29779599 (+)
G2221478 NA non-coding downstream 91098 29782340 ~ 29782579 (+)
G2220253 NA other upstream 650435 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1122839 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1124233 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 1364991 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 1828619 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3880898 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 5490727 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5826992 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 6002068 35693310 ~ 35735400 (+)

Expression


Co-expression Network