G2221554


Basic Information

Item Value
gene id G2221554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 29835745 ~ 29835990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2540863
tgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaatgcactgtatattagtacactcgtaacaacctaAGCATTATGAAATGTCACCCTTTAaaacttcttacggctgaaatcccATTAACGgaatcgatatgacaacagccagtgaaagtgcagggagccaaatttaaaacagaaatctcataactaaaattcctcaaacatacaagtattatacacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2540863 True 246 lncRNA 0.39 1 29835745 29835990

Neighbor

gene id symbol gene type direction distance location
LOC110521693 LOC106584143 coding upstream 230836 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 531805 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 682041 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 834253 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 847170 28983183 ~ 28988575 (+)
LOC110521700 NA coding downstream 700246 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 1010691 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 1022848 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 1027634 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 1042696 30878686 ~ 30880955 (+)
G2221547 NA non-coding upstream 4680 29830864 ~ 29831065 (+)
G2221511 NA non-coding upstream 28104 29807402 ~ 29807641 (+)
G2221499 NA non-coding upstream 38751 29796740 ~ 29796994 (+)
G2221496 NA non-coding upstream 40992 29794500 ~ 29794753 (+)
G2221478 NA non-coding upstream 53166 29782340 ~ 29782579 (+)
G2221660 NA non-coding downstream 147231 29983221 ~ 30062109 (+)
G2221667 NA non-coding downstream 159434 29995424 ~ 29998236 (+)
G2221859 NA non-coding downstream 233758 30069748 ~ 30070416 (+)
G2221861 NA non-coding downstream 235572 30071562 ~ 30099403 (+)
G2222056 NA non-coding downstream 519314 30355304 ~ 30355530 (+)
G2220253 NA other upstream 813863 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1286267 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1287661 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 1528419 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 1992047 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3736150 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 5345979 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5682244 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5857320 35693310 ~ 35735400 (+)

Expression


Co-expression Network