G2221660


Basic Information

Item Value
gene id G2221660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 29983221 ~ 30062109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2540979
ttctcgattggattcaggtctggactttgacttggccattctatcacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttgaatcattgtcttgttggaagacaaatctccatcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccatgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatgctgtgttgcttttacgccaaacat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2540979 True 321 lncRNA 0.43 2 29983221 30062109

Neighbor

gene id symbol gene type direction distance location
LOC110521693 LOC106584143 coding upstream 378312 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 679281 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 829517 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 981729 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 994646 28983183 ~ 28988575 (+)
LOC110521700 NA coding downstream 474127 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 784572 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 796729 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 801515 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 816577 30878686 ~ 30880955 (+)
G2221554 NA non-coding upstream 147231 29835745 ~ 29835990 (+)
G2221547 NA non-coding upstream 152156 29830864 ~ 29831065 (+)
G2221511 NA non-coding upstream 175580 29807402 ~ 29807641 (+)
G2221499 NA non-coding upstream 186227 29796740 ~ 29796994 (+)
G2221496 NA non-coding upstream 188468 29794500 ~ 29794753 (+)
G2221859 NA non-coding downstream 7639 30069748 ~ 30070416 (+)
G2221861 NA non-coding downstream 9453 30071562 ~ 30099403 (+)
G2222056 NA non-coding downstream 293195 30355304 ~ 30355530 (+)
G2222057 NA non-coding downstream 295384 30357493 ~ 30357733 (+)
G2222064 NA non-coding downstream 323858 30385967 ~ 30386440 (+)
G2220253 NA other upstream 961339 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1433743 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1435137 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 1675895 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2139523 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3510031 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 5119860 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5456125 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5631201 35693310 ~ 35735400 (+)

Expression


Co-expression Network