Gene
RNA
| Item | Value |
|---|---|
| gene id | G2221667 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050570.1 |
| NCBI id | CM025857.1 |
| chromosome length | 46327593 |
| location | 29995424 ~ 29998236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2540988 | False | 220 | lncRNA | 0.40 | 2 | 29995424 | 29998236 |
| TU2540989 | True | 220 | lncRNA | 0.40 | 2 | 29995424 | 29998236 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521693 | LOC106584143 | coding | upstream | 390515 | 29598550 ~ 29604909 (+) |
| LOC110521691 | LOC106584140 | coding | upstream | 691484 | 29284901 ~ 29303940 (+) |
| LOC100135939 | LOC106584136 | coding | upstream | 841720 | 29130397 ~ 29153704 (+) |
| paics | LOC106584129 | coding | upstream | 993932 | 28992608 ~ 29001492 (+) |
| si:dkeyp-117h8.4 | LOC106584130 | coding | upstream | 1006849 | 28983183 ~ 28988575 (+) |
| LOC110521700 | NA | coding | downstream | 538000 | 30536236 ~ 30548668 (+) |
| LOC110521701 | LOC106584149 | coding | downstream | 848445 | 30846681 ~ 30850528 (+) |
| si:ch211-117l17.6 | NA | coding | downstream | 860602 | 30858838 ~ 30860485 (+) |
| LOC110521703 | LOC106584150 | coding | downstream | 865388 | 30863624 ~ 30866524 (+) |
| rgs2 | LOC106584094 | coding | downstream | 880450 | 30878686 ~ 30880955 (+) |
| G2221554 | NA | non-coding | upstream | 159434 | 29835745 ~ 29835990 (+) |
| G2221547 | NA | non-coding | upstream | 164359 | 29830864 ~ 29831065 (+) |
| G2221511 | NA | non-coding | upstream | 187783 | 29807402 ~ 29807641 (+) |
| G2221499 | NA | non-coding | upstream | 198430 | 29796740 ~ 29796994 (+) |
| G2221496 | NA | non-coding | upstream | 200671 | 29794500 ~ 29794753 (+) |
| G2221859 | NA | non-coding | downstream | 71512 | 30069748 ~ 30070416 (+) |
| G2221861 | NA | non-coding | downstream | 73326 | 30071562 ~ 30099403 (+) |
| G2222056 | NA | non-coding | downstream | 357068 | 30355304 ~ 30355530 (+) |
| G2222057 | NA | non-coding | downstream | 359257 | 30357493 ~ 30357733 (+) |
| G2222064 | NA | non-coding | downstream | 387731 | 30385967 ~ 30386440 (+) |
| G2220253 | NA | other | upstream | 973542 | 29021586 ~ 29021882 (+) |
| G2219991 | NA | other | upstream | 1445946 | 28549029 ~ 28549478 (+) |
| G2219989 | LOC105940532 | other | upstream | 1447340 | 28547538 ~ 28548084 (+) |
| fip1l1a | fip1l1 | other | upstream | 1688098 | 28260830 ~ 28307538 (+) |
| LOC110521656 | LOC106584103 | other | upstream | 2151726 | 27823914 ~ 27844041 (+) |
| G2225948 | NA | other | downstream | 3573904 | 33572140 ~ 33604894 (+) |
| LOC110521757 | NA | other | downstream | 5183733 | 35181902 ~ 35190209 (+) |
| G2228777 | NA | other | downstream | 5519998 | 35518234 ~ 35519242 (+) |
| LOC110521768 | sirt5 | other | downstream | 5695074 | 35693310 ~ 35735400 (+) |
