G2222056


Basic Information

Item Value
gene id G2222056
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30355304 ~ 30355530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2541392
ggcCGCCGTAGGAGATTCCGGACTGTGGGCCGccgtaggaggttccggactgtgggccgccgtaggaggttccggactgtgggccgccgtaggaggttccggactgtggaccgccgtaggaggttccggactgtggaccgtcgtaggaggttacggactgtggaccgtcgtaggaggttccggactgagGACCGTCataggaagctctggactgtgaaccgtcgccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2541392 True 227 lncRNA 0.66 1 30355304 30355530

Neighbor

gene id symbol gene type direction distance location
LOC110521693 LOC106584143 coding upstream 750395 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1051364 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1201600 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1353812 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 1366729 28983183 ~ 28988575 (+)
LOC110521700 NA coding downstream 180706 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 491151 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 503308 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 508094 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 523156 30878686 ~ 30880955 (+)
G2221861 NA non-coding upstream 255901 30071562 ~ 30099403 (+)
G2221859 NA non-coding upstream 284888 30069748 ~ 30070416 (+)
G2221660 NA non-coding upstream 293195 29983221 ~ 30062109 (+)
G2221667 NA non-coding upstream 357068 29995424 ~ 29998236 (+)
G2221554 NA non-coding upstream 519314 29835745 ~ 29835990 (+)
G2222057 NA non-coding downstream 1963 30357493 ~ 30357733 (+)
G2222064 NA non-coding downstream 30437 30385967 ~ 30386440 (+)
G2222073 NA non-coding downstream 47032 30402562 ~ 30402772 (+)
G2222275 NA non-coding downstream 48387 30403917 ~ 30404124 (+)
G2222290 NA non-coding downstream 56552 30412082 ~ 30412310 (+)
G2220253 NA other upstream 1333422 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1805826 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1807220 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2047978 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2511606 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3216610 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4826439 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5162704 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5337780 35693310 ~ 35735400 (+)

Expression


Co-expression Network