G2222057


Basic Information

Item Value
gene id G2222057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050570.1
NCBI id CM025857.1
chromosome length 46327593
location 30357493 ~ 30357733 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2541393
Gatggtgtcatgtactgtcatgttgtgtcttgtctctgtcctttcccttcaccctgtctccctctgctggtcgttgttaggttaccttttctcccccgctttcccccagctgttccttgtctcctctaactacccattcaccccgtttcccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgttcctgtccttgtcggattcttgtttgttgtgtttcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2541393 True 241 lncRNA 0.49 1 30357493 30357733

Neighbor

gene id symbol gene type direction distance location
LOC110521693 LOC106584143 coding upstream 752584 29598550 ~ 29604909 (+)
LOC110521691 LOC106584140 coding upstream 1053553 29284901 ~ 29303940 (+)
LOC100135939 LOC106584136 coding upstream 1203789 29130397 ~ 29153704 (+)
paics LOC106584129 coding upstream 1356001 28992608 ~ 29001492 (+)
si:dkeyp-117h8.4 LOC106584130 coding upstream 1368918 28983183 ~ 28988575 (+)
LOC110521700 NA coding downstream 178503 30536236 ~ 30548668 (+)
LOC110521701 LOC106584149 coding downstream 488948 30846681 ~ 30850528 (+)
si:ch211-117l17.6 NA coding downstream 501105 30858838 ~ 30860485 (+)
LOC110521703 LOC106584150 coding downstream 505891 30863624 ~ 30866524 (+)
rgs2 LOC106584094 coding downstream 520953 30878686 ~ 30880955 (+)
G2222056 NA non-coding upstream 1963 30355304 ~ 30355530 (+)
G2221861 NA non-coding upstream 258090 30071562 ~ 30099403 (+)
G2221859 NA non-coding upstream 287077 30069748 ~ 30070416 (+)
G2221660 NA non-coding upstream 295384 29983221 ~ 30062109 (+)
G2221667 NA non-coding upstream 359257 29995424 ~ 29998236 (+)
G2222064 NA non-coding downstream 28234 30385967 ~ 30386440 (+)
G2222073 NA non-coding downstream 44829 30402562 ~ 30402772 (+)
G2222275 NA non-coding downstream 46184 30403917 ~ 30404124 (+)
G2222290 NA non-coding downstream 54349 30412082 ~ 30412310 (+)
G2222519 NA non-coding downstream 203336 30561069 ~ 30561526 (+)
G2220253 NA other upstream 1335611 29021586 ~ 29021882 (+)
G2219991 NA other upstream 1808015 28549029 ~ 28549478 (+)
G2219989 LOC105940532 other upstream 1809409 28547538 ~ 28548084 (+)
fip1l1a fip1l1 other upstream 2050167 28260830 ~ 28307538 (+)
LOC110521656 LOC106584103 other upstream 2513795 27823914 ~ 27844041 (+)
G2225948 NA other downstream 3214407 33572140 ~ 33604894 (+)
LOC110521757 NA other downstream 4824236 35181902 ~ 35190209 (+)
G2228777 NA other downstream 5160501 35518234 ~ 35519242 (+)
LOC110521768 sirt5 other downstream 5335577 35693310 ~ 35735400 (+)

Expression


Co-expression Network